RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TMEM150CB9EJG8 249 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 PLGP00747 810 aaPredicted RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 F11P03951 625 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 MAS1P04201 325 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ARAFP10398 606 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 CEBPBP17676 345 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 PRKACBP22694 351 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
HPS4-208ENST00000464362 SQSTM1Q13501 440 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 CST6Q15828 149 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 KLHL24Q6TFL4 600 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 L3MBTL4Q8NA19 623 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SYT14Q8NB59 555 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 OR2T35Q8NGX2 323 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 RPLP0P6Q8NHW5 317 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 DEDD2Q8WXF8 326 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 OR4K3Q96R72 315 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ALG8Q9BVK2 526 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ABCG4Q9H172 646 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SLC25A18Q9H1K4 315 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ACTL8Q9H568 366 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 C11orf49Q9H6J7 331 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 PLEKHA1Q9HB21 404 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 HSFX1Q9UBD0 423 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 PCDHGB7Q9Y5F8 929 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 HEBP2Q9Y5Z4 205 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 FER1L6Q2WGJ9 1857 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 TRAV27A0A087WT01 109 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 RENP00797 406 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 PSMA6P60900 246 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 TATDN3Q17R31 274 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ALG10BQ5I7T1 473 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 WDR45BQ5MNZ6 344 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SYT6Q5T7P8 510 aaPredicted RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 AFMIDQ63HM1 303 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ALG1LQ6GMV1 187 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SNAPC3Q92966 411 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 EXO5Q9H790 373 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 LIPT1Q9Y234 373 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 TNS1Q9HBL0 1735 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 CLDN24A6NM45 220 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 M0R233 179 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 PRODHO43272 600 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 HCRTR2O43614 444 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 IFNA7P01567 189 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 CASP3P42574 277 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SOX9P48436 509 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 IHHQ14623 411 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 EXOSC7Q15024 291 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 GPR19Q15760 415 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ZNF385BQ569K4 471 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ANKRD54Q6NXT1 300 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 LYSMD2Q8IV50 215 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 METTL21AQ8WXB1 218 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 TRIM43Q96BQ3 446 aaPredicted RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 FOXN4Q96NZ1 517 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 CCDC32Q9BV29 185 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 POLDIP3Q9BY77 421 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 RBM38Q9H0Z9 239 aaKnown RBP8.56□□□□□ -1.04
HPS4-208ENST00000464362 TMEM45AQ9NWC5 275 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 SNX11Q9Y5W9 270 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 APC2O95996 2303 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 ASXL3Q9C0F0 2248 aa8.56□□□□□ -1.04
HPS4-208ENST00000464362 C13orf42A0A1B0GVH6 325 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 FAM155AB1AL88 458 aaPredicted RBP8.55□□□□□ -1.04
HPS4-208ENST00000464362 SMLR1H3BR10 107 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 NUPL2O15504 423 aaKnown RBP8.55□□□□□ -1.04
HPS4-208ENST00000464362 AGR2O95994 175 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 HTR1AP08908 422 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 FURINP09958 794 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 ANXA3P12429 323 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 NPPBP16860 134 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 SSTR2P30874 369 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 LCN1P31025 176 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 PRLHRP49683 370 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 WDR5P61964 334 aaKnown RBP8.55□□□□□ -1.04
HPS4-208ENST00000464362 RPS25P62851 125 aaKnown RBP8.55□□□□□ -1.04
HPS4-208ENST00000464362 ARFRP1Q13795 201 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 LTB4RQ15722 352 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 KLHL26Q53HC5 615 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 CDKL4Q5MAI5 379 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 SLC39A5Q6ZMH5 540 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 PAQR7Q86WK9 346 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 ZNF101Q8IZC7 436 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 SYNPOQ8N3V7 929 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 OR6T1Q8NGN1 323 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 CDS1Q92903 461 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 S100A16Q96FQ6 103 aaKnown RBP8.55□□□□□ -1.04
HPS4-208ENST00000464362 PEX11GQ96HA9 241 aa8.55□□□□□ -1.04
HPS4-208ENST00000464362 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms