RNA–Protein interactions for RNA: ENST00000461661.1

ITCH-203, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene ITCH, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-203ENST00000461661 ATP6V0A1Q93050 837 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 SLC35C1Q96A29 364 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 SLCO4A1Q96BD0 722 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 DYNLL2Q96FJ2 89 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 RCHY1Q96PM5 261 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 NAP1L3Q99457 506 aaPredicted RBP1.92□□□□□ -2.1
ITCH-203ENST00000461661 S1PR3Q99500 378 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 SSX3Q99909 188 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 TEX13BQ9BXU2 312 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 OSBPL8Q9BZF1 889 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 SLC39A8Q9C0K1 460 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 C11orf49Q9H6J7 331 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 RPAP3Q9H6T3 665 aaPredicted RBP1.92□□□□□ -2.1
ITCH-203ENST00000461661 VCPKMTQ9H867 229 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 PLEKHA3Q9HB20 300 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 DNAJC11Q9NVH1 559 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 Q9UF83 564 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 MRPS2Q9Y399 296 aaKnown RBP1.92□□□□□ -2.1
ITCH-203ENST00000461661 TMED7Q9Y3B3 224 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 MRPL11Q9Y3B7 192 aaKnown RBP1.92□□□□□ -2.1
ITCH-203ENST00000461661 COL4A4P53420 1690 aaPredicted RBP1.92□□□□□ -2.1
ITCH-203ENST00000461661 SCN10AQ9Y5Y9 1956 aa1.92□□□□□ -2.1
ITCH-203ENST00000461661 PIEZO1Q92508 2521 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 RIF1Q5UIP0 2472 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 TDRD6O60522 2096 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 IGKV6D-21A0A0A0MT36 114 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 A0A0A6YYC8 382 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 TEX48A0A1B0GUV7 120 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SLC9B1P1A6NJY1 282 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 FAM220BPB1ANY3 271 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 F5H6K3 240 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 I3L1I5 382 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 CHEK1O14757 476 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ARPC1BO15143 372 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 RNF113AO15541 343 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 GPAA1O43292 621 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 FLOT1O75955 427 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SLC25A27O95847 323 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 EPOP01588 193 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 GSTA2P09210 222 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ODC1P11926 461 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 OR1D2P34982 312 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SPRP35270 261 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 ALDH3B1P43353 468 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 RPL34P49207 117 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 SLC12A3P55017 1021 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 CASP9P55211 416 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 UCP2P55851 309 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 RPS27AP62979 156 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 KLRC3Q07444 240 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 HSPA14Q0VDF9 509 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LCP2Q13094 533 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 MSLNQ13421 630 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 RFTN1Q14699 578 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 LASP1Q14847 261 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 SPHARQ15513 63 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ZNF79Q15937 498 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 STX1AQ16623 288 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 PCK2Q16822 640 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ECSCRQ19T08 205 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LRRC26Q2I0M4 334 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 RFTN2Q52LD8 501 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 SBK1Q52WX2 424 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 VWA2Q5GFL6 755 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 DMKNQ6E0U4 476 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 SNRNP48Q6IEG0 339 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 ALKBH5Q6P6C2 394 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 RFWD3Q6PCD5 774 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 B3GLCTQ6Y288 498 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SIGLEC15Q6ZMC9 328 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 C17orf107Q6ZR85 190 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 NUFIP2Q7Z417 695 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 ZNF410Q86VK4 478 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SLC43A2Q8N370 569 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 FBXW8Q8N3Y1 598 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 TRPV1Q8NER1 839 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 OR13C5Q8NGS8 318 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 OR6F1Q8NGZ6 308 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LIPHQ8WWY8 451 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 KRT35Q92764 455 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 BPIFA2Q96DR5 249 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 HSD17B14Q9BPX1 270 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 DDX50Q9BQ39 737 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 FAM213AQ9BRX8 229 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 GANQ9H2C0 597 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 S100A14Q9HCY8 104 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 CUTCQ9NTM9 273 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ACOXLQ9NUZ1 547 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 ARMCX1Q9P291 453 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 IL19Q9UHD0 177 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SLC6A5Q9Y345 797 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 SNX5Q9Y5X3 404 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LAMA3Q16787 3333 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LAMA2P24043 3122 aaKnown RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 PTPRZ1P23471 2315 aaPredicted RBP1.91□□□□□ -2.1
ITCH-203ENST00000461661 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 COL6A3P12111 3177 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 LAMA4Q16363 1823 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 TTC41PQ6P2S7 1318 aa1.91□□□□□ -2.1
ITCH-203ENST00000461661 TRANK1O15050 2925 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms