RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RFX3P48380 749 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TRAP1Q12931 704 aaKnown RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 BNIP2Q12982 314 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 VEZF1Q14119 521 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 FLOT2Q14254 428 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 MAPK14Q16539 360 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF630Q2M218 657 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ARHGAP11BQ3KRB8 267 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 SPATS1Q496A3 300 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 GPAT3Q53EU6 434 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DCST2Q5T1A1 773 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TYW3Q6IPR3 259 aaKnown RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 LCN8Q6JVE9 175 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TCTN3Q6NUS6 607 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ZCCHC12Q6PEW1 402 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 FRRS1Q6ZNA5 592 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DHFR2Q86XF0 187 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 BCORP1Q8N888 145 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 COX18Q8N8Q8 333 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CHDHQ8NE62 594 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TAMM41Q96BW9 452 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 VMP1Q96GC9 406 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 BTBD9Q96Q07 612 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 STACQ99469 402 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TREX2Q9BQ50 279 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DUSP22Q9NRW4 184 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 KCND3Q9UK17 655 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 AP3M1Q9Y2T2 418 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CHST2Q9Y4C5 530 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 NSG1A0A0A6YYJ2 146 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TCRBV3S1A0A5B6 114 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CLDN24A6NM45 220 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 PEX12O00623 359 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DYRK3O43781 588 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 NADKO95544 446 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 STAMBPO95630 424 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 EPPINO95925 133 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 SERPINA1P01009 418 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TNFRSF1BP20333 461 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DRD5P21918 477 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 POU6F2P78424 691 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 MRPS22P82650 360 aaKnown RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 RBBP4Q09028 425 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DUSP7Q16829 419 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 LRRC23Q53EV4 343 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 PLAG1Q6DJT9 500 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 REEP3Q6NUK4 255 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ERICH5Q6P6B1 374 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 HSDL2Q6YN16 418 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 LIAT1Q6ZQX7 453 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CCDC80Q76M96 950 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 SMYD1Q8NB12 490 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TMBIM1Q969X1 311 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 EFHD2Q96C19 240 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 LCORQ96JN0 433 aaPredicted RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ART5Q96L15 291 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 SPATA9Q9BWV2 254 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 BTBD2Q9BX70 525 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 GORASP2Q9H8Y8 452 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 DCAF13Q9NV06 445 aaKnown RBP10.14□□□□□ -0.79
SCN9A-205ENST00000454569 P2RX2Q9UBL9 471 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 COPS7AQ9UBW8 275 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 PRODH2Q9UF12 536 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CBLCQ9ULV8 474 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 DUXAA6NLW8 204 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 C17orf51A8MQB3 221 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 H0Y3Z8 333 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 BCAS1O75363 584 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-205ENST00000454569 KRT36O76013 467 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 CAPNS1P04632 268 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 PRKAR1AP10644 381 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 TRHRP34981 398 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-205ENST00000454569 PIGAP37287 484 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 CLCN2P51788 898 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 POLE2P56282 527 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 PLAURQ03405 335 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 CHAF1BQ13112 559 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 RCN1Q15293 331 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 GPR68Q15743 365 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 B3GNTL1Q67FW5 361 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-205ENST00000454569 SLC29A4Q7RTT9 530 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 C16orf62Q7Z3J2 963 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 VTCN1Q7Z7D3 282 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 VRK2Q86Y07 508 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 C7orf57Q8NEG2 295 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 M1APQ8TC57 530 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 CANT1Q8WVQ1 401 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 PSMF1Q92530 271 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 FGF11Q92914 225 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 FAM162AQ96A26 154 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 ARSGQ96EG1 525 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 NSMCE2Q96MF7 247 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 TRNT1Q96Q11 434 aaKnown RBP10.13□□□□□ -0.79
SCN9A-205ENST00000454569 RTN4RQ9BZR6 473 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF350Q9GZX5 532 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 DCLRE1BQ9H816 532 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms