RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TSPEARQ8WU66 669 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 HGDQ93099 445 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 ELAC2Q9BQ52 826 aaKnown RBP12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 INPP5KQ9BT40 448 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 BTBD2Q9BX70 525 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 ZNF385DQ9H6B1 395 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 CNOT11Q9UKZ1 510 aaKnown RBP12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 CHD6Q8TD26 2715 aa12.01□□□□□ -0.49
ERGIC3-209ENST00000447986 A0A1W2PP18 115 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 COL6A6A6NMZ7 2263 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 G3V3Y1 287 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 TFECO14948 347 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 ANGPT2O15123 496 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 CCDC22O60826 627 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 AK1P00568 194 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ATP6V1C1P21283 382 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ADSLP30566 484 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 LCN1P31025 176 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 DNASE1L1P49184 302 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 KHKP50053 298 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 PMP22Q01453 160 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 MAPRE2Q15555 327 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ATAD3BQ5T9A4 648 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SAXO2Q658L1 398 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 BRICD5Q6PL45 260 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SLC22A16Q86VW1 577 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 CLEC4FQ8N1N0 589 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 MIPOL1Q8TD10 442 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 C10orf82Q8WW14 230 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 NR4A3Q92570 626 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ZNF597Q96LX8 424 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 JSRP1Q96MG2 331 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 OR7D2Q96RA2 312 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 OSBPL11Q9BXB4 747 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ANGPTL4Q9BY76 406 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 IL1RL2Q9HB29 575 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SERHLQ9NQF3 203 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 DEPPQ9NTK1 212 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 B4GALT7Q9UBV7 327 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 LEF1Q9UJU2 399 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 NTNG1Q9Y2I2 539 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 NDUFAF1Q9Y375 327 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 TLN1Q9Y490 2541 aaKnown RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 GXYLT2A0PJZ3 443 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 PRAMEF25A6NGN4 478 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ASNA1O43681 348 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 KCNK2O95069 426 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 GSNP06396 782 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 HPGDP15428 266 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 CDKN2CP42773 168 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 CPEB4Q17RY0 729 aaKnown RBP eCLIP12□□□□□ -0.49
ERGIC3-209ENST00000447986 EXOSC6Q5RKV6 272 aaKnown RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 SLC2A7Q6PXP3 512 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 BNC2Q6ZN30 1099 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 GTF2H4Q92759 462 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 CDS1Q92903 461 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 OTUB1Q96FW1 271 aaPredicted RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 NODALQ96S42 347 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 BARD1Q99728 777 aaKnown RBP12□□□□□ -0.49
ERGIC3-209ENST00000447986 OR51I1Q9H343 314 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 HHATLQ9HCP6 504 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SDHAF3Q9NRP4 125 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 ABCG2Q9UNQ0 655 aa12□□□□□ -0.49
ERGIC3-209ENST00000447986 SLC22A2O15244 555 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 CYP4B1P13584 511 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 EDN3P14138 238 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 CAPN3P20807 821 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 ELAVL4P26378 380 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 MAGEA8P43361 318 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 MAN2A2P49641 1150 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 RPS26P62854 115 aaKnown RBP11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 KRTCAP3Q53RY4 240 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 DCST2Q5T1A1 773 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 FIGNL1Q6PIW4 674 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 C16orf62Q7Z3J2 963 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 RNF130Q86XS8 419 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 GALNT11Q8NCW6 608 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 OR5D16Q8NGK9 328 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 SLX1AQ9BQ83 275 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 TTTY12Q9BZ98 90 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 TBL1XR1Q9BZK7 514 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 RAD21L1Q9H4I0 556 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 ZFP64Q9NPA5 681 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 SAR1AQ9NR31 198 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 TUBA8Q9NY65 449 aaPredicted RBP11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 SPTA1P02549 2419 aa11.99□□□□□ -0.49
ERGIC3-209ENST00000447986 A0A096LPI6 279 aa11.98□□□□□ -0.49
ERGIC3-209ENST00000447986 SNX3O60493 162 aa11.98□□□□□ -0.49
ERGIC3-209ENST00000447986 ICOSLGO75144 302 aa11.98□□□□□ -0.49
ERGIC3-209ENST00000447986 DRD4P21917 467 aa11.98□□□□□ -0.49
ERGIC3-209ENST00000447986 PPIBP23284 216 aaKnown RBP11.98□□□□□ -0.49
ERGIC3-209ENST00000447986 EVI2BP34910 448 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms