RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NANPQ8TBE9 248 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 MIPOL1Q8TD10 442 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM3CQ92520 227 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 UPRTQ96BW1 309 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 NKX3-1Q99801 234 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 NUP58Q9BVL2 599 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 PAPOLGQ9BWT3 736 aaKnown RBP3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 RPRD1BQ9NQG5 326 aaKnown RBP3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 UFSP2Q9NUQ7 469 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 UTP6Q9NYH9 597 aaKnown RBP3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 GHRLQ9UBU3 117 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 TUBGCP4Q9UGJ1 667 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 SUN2Q9UH99 717 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 EMCNQ9ULC0 261 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 RPH3ALQ9UNE2 315 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 PIGLQ9Y2B2 252 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 WDR97A6NE52 1622 aa3.79□□□□□ -1.8
HMGB1P48-201ENST00000446155 A0A087WW49 117 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 MEIOCA2RUB1 952 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 GLTPD2A6NH11 291 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 BTN3A3O00478 584 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 DUX1O43812 170 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 CTAG2O75638 210 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 CDC123O75794 336 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SCGNO76038 276 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 IGLV1-44P01699 117 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 MX1P20591 662 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 LAP3P28838 519 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 PLA2G16P53816 162 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ATP12AP54707 1039 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 RAG2P55895 527 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SEC61GP60059 68 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ABCE1P61221 599 aaKnown RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 NOP14P78316 857 aaKnown RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 TGM3Q08188 693 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 LEG1Q6P5S2 330 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC25A47Q6Q0C1 308 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 TMEM184AQ6ZMB5 413 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 KIAA1328Q86T90 577 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ECHDC2Q86YB7 292 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SLC38A6Q8IZM9 456 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 TMEM123Q8N131 208 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 LRRC43Q8N309 656 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 NIPA2Q8N8Q9 360 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 FAM184AQ8NB25 1140 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR5AP2Q8NGF4 316 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 OR5M9Q8NGP3 310 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ANKRD49Q8WVL7 239 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 LIPHQ8WWY8 451 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ADIPOR1Q96A54 375 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 GMPPAQ96IJ6 420 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 CAPNS2Q96L46 248 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 PRICKLE1Q96MT3 831 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 TGM7Q96PF1 710 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 RIT2Q99578 217 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 PITPNM3Q9BZ71 974 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 CLSTN2Q9H4D0 955 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 RHOJQ9H4E5 214 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 ALG9Q9H6U8 611 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 IL1RL2Q9HB29 575 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 FANCEQ9HB96 536 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SMOXQ9NWM0 555 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 KLRF1Q9NZS2 232 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 LCMT1Q9UIC8 334 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 KIAA1257Q9ULG3 409 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 NAP1L2Q9ULW6 460 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 IFT52Q9Y366 437 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 PLB1Q6P1J6 1458 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 YEATS2Q9ULM3 1422 aa3.78□□□□□ -1.8
HMGB1P48-201ENST00000446155 SHROOM2Q13796 1616 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 ADCY10Q96PN6 1610 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 GLI2P10070 1586 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 LOC390937A0A1W2PQ73 354 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 ESYT2A0FGR8 921 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 FOXE1O00358 373 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 STX7O15400 261 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 TPST2O60704 377 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 NDUFB10O96000 172 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 PABPC4LP0CB38 370 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 ANXA3P12429 323 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CCT6AP40227 531 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 SOX3P41225 446 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CCT3P49368 545 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CDH4P55283 916 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 RIGQ13278 110 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 HNRNPDQ14103 355 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 MESDQ14696 234 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 GANABQ14697 944 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 DPYSL2Q16555 572 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 HADHQ16836 314 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 BEND6Q5SZJ8 279 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 OTUD3Q5T2D3 398 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CARD17Q5XLA6 110 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 C16orf87Q6PH81 154 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CLEC2AQ6UVW9 174 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 KDM7AQ6ZMT4 941 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms