RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TIMP3P35625 211 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 SERPINB5P36952 375 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 DGKQP52824 942 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 PRKAG1P54619 331 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 MANFP55145 182 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 VPS26BQ4G0F5 336 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 RFTN2Q52LD8 501 aaPredicted RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 CES4AQ5XG92 561 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 NSUN5P2Q63ZY6 315 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 RNF165Q6ZSG1 346 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 R3HCC1LQ7Z5L2 792 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 ACBD4Q8NC06 268 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 WDYHV1Q96HA8 205 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 PPP3R2Q96LZ3 170 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 TREX2Q9BQ50 279 aaPredicted RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 TUBB1Q9H4B7 451 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 SDHAF3Q9NRP4 125 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 KCNN3Q9UGI6 736 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 BAIAP2L1Q9UHR4 511 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 FBXL2Q9UKC9 423 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 ITGB1BP2Q9UKP3 347 aa18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 RPH3AQ9Y2J0 694 aaPredicted RBP18.06■□□□□ 0.48
SHROOM1-204ENST00000440118 SKAP2O75563 359 aaPredicted RBP18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 PRPS2P11908 318 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 CAPN3P20807 821 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 DPP4P27487 766 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 ASCL1P50553 236 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 ATP6AP1LQ52LC2 224 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 Q6ZSR9 355 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 SEM1Q6ZVN7 128 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 TRIM42Q8IWZ5 723 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 NAXEQ8NCW5 288 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 GPR151Q8TDV0 419 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 TBL1XR1Q9BZK7 514 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 CENPHQ9H3R5 247 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 ABCG2Q9UNQ0 655 aa18.05■□□□□ 0.48
SHROOM1-204ENST00000440118 CD8B2A6NJW9 211 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 TTC36A6NLP5 189 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 KDM4EB2RXH2 506 aaPredicted RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 EEF1E1-BLOC1S5C9J1V9 151 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 RGS16O15492 202 aaPredicted RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 EEF1E1O43324 174 aaKnown RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 FGF4P08620 206 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 GABRA3P34903 492 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 RPL3P39023 403 aaKnown RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 GAB1Q13480 694 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 RAET1LQ5VY80 246 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 CHMP1BQ7LBR1 199 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 CDH24Q86UP0 819 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 RELL2Q8NC24 303 aaPredicted RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 CEP70Q8NHQ1 597 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 FBXO30Q8TB52 745 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 SLC9A6Q92581 669 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 JADE3Q92613 823 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 NTNG2Q96CW9 530 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 CHMP6Q96FZ7 201 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 RMND5BQ96G75 393 aaPredicted RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 ZNF764Q96H86 408 aaPredicted RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 FCRL1Q96LA6 429 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 MS4A4EQ96PG1 132 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 LMF2Q9BU23 707 aaKnown RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 PTGES2Q9H7Z7 377 aa18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 FAM120CQ9NX05 1096 aaKnown RBP18.04■□□□□ 0.48
SHROOM1-204ENST00000440118 PDZD2O15018 2839 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 PEX11AO75192 247 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 PSMG1O95456 288 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 IL33O95760 270 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 IFI6P09912 130 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 BCKDHAP12694 445 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 CEACAM8P31997 349 aaPredicted RBP18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 PEX19P40855 299 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 KRTAP10-9P60411 292 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 ZNF385BQ569K4 471 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 ARSKQ6UWY0 536 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 LRIG3Q6UXM1 1119 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 NUP43Q8NFH3 380 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 MTERF3Q96E29 417 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 TUBA1CQ9BQE3 449 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 C1orf50Q9BV19 199 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 DSN1Q9H410 356 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 CALHM2Q9HA72 323 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 ZNF629Q9UEG4 869 aaPredicted RBP18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 GIMAP2Q9UG22 337 aa18.03■□□□□ 0.48
SHROOM1-204ENST00000440118 MBD3L4A6NDZ8 208 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 MBD3L3A6NE82 208 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 MBD3L5A6NJ08 208 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 HSPA4LO95757 839 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 BPGMP07738 259 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 TMIGD3P0DMS9 266 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 CPN1P15169 458 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 HK1P19367 917 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 EFNA1P20827 205 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 OPRM1P35372 400 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 KIR2DL3P43628 341 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 STARP49675 285 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 ZNF136P52737 540 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 DSCR4P56555 118 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 PRR5P85299 388 aa18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 GANABQ14697 944 aaKnown RBP18.02■□□□□ 0.48
SHROOM1-204ENST00000440118 P4HA3Q7Z4N8 544 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms