RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CDH10Q9Y6N8 788 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 H3BUI4 141 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GNB5O14775 395 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 APOC3P02656 99 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GYPBP06028 91 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ACP5P13686 325 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 PSMB5P28074 263 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 HLA-FP30511 346 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SOX9P48436 509 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 TPBGQ13641 420 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GPR68Q15743 365 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ZNF750Q32MQ0 723 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 MINDY4Q4G0A6 757 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 C19orf48Q6RUI8 117 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TMEM107Q6UX40 140 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ALKAL2Q6UX46 152 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 RTL4Q6ZR62 310 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NUDT13Q86X67 352 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ADGRF3Q8IZF5 1079 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TOR1AIP2Q8NFQ8 470 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 OR51L1Q8NGJ5 315 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GNPDA2Q8TDQ7 276 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 MCHR1Q99705 422 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GPA33Q99795 319 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.52□□□□□ -1.052e-11■■■■□ 22.6
COPB1-202ENST00000439561 PPP1R3EQ9H7J1 279 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TEX10Q9NXF1 929 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 AP1M2Q9Y6Q5 423 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 A0A087WUU8 490 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 TEX51A0A1B0GUA7 166 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 SLC9B1P1A6NJY1 282 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 C1orf105O95561 183 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 LGI1O95970 557 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 PXNP49023 591 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 AGFG1P52594 562 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 BLVRAP53004 296 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 TRAM2Q15035 370 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 GRK1Q15835 563 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 PRSS53Q2L4Q9 553 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 RPTNQ6XPR3 784 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 ZNF782Q6ZMW2 699 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 VRK2Q86Y07 508 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 OR5AR1Q8NGP9 310 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 ADAMTS15Q8TE58 950 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 UCN3Q969E3 161 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 DDOQ99489 341 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 GAL3ST1Q99999 423 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 NT5DC2Q9H857 520 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 CHST2Q9Y4C5 530 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 A0A1W2PPL8 197 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 TMEM129A0AVI4 362 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 HMGN4O00479 90 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 FZD7O75084 574 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 RGS11O94810 467 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 HMGN2P05204 90 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 FNTBP49356 437 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 KHKP50053 298 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 DGCR2P98153 550 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 PRKCZQ05513 592 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 ST3GAL3Q11203 375 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 PRPF38BQ5VTL8 546 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 METAP1DQ6UB28 335 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 TMCO2Q7Z6W1 182 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 SLC9B2Q86UD5 537 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 LRRC28Q86X40 367 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 TMEM25Q86YD3 366 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 NPAS4Q8IUM7 802 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 CPA6Q8N4T0 437 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 DUSP18Q8NEJ0 188 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 OR11H7Q8NGC8 314 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 OR51A7Q8NH64 312 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 BCL7CQ8WUZ0 217 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 C16orf58Q96GQ5 468 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 ARHGAP9Q9BRR9 750 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 NDC1Q9BTX1 674 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 FAIM2Q9BWQ8 316 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 RHBGQ9H310 441 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 RETREG1Q9H6L5 497 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 KLHL42Q9P2K6 505 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 AK6Q9Y3D8 172 aaKnown RBP8.51□□□□□ -1.05
COPB1-202ENST00000439561 RWDD3Q9Y3V2 267 aa8.51□□□□□ -1.05
COPB1-202ENST00000439561 A8MVJ9 347 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 PPM1DO15297 605 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 HYAL3O43820 417 aaPredicted RBP8.5□□□□□ -1.05
COPB1-202ENST00000439561 SLCO2B1O94956 709 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 TFP02787 698 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 M6PRP20645 277 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 F8A1P23610 371 aa8.5□□□□□ -1.05
COPB1-202ENST00000439561 KIAA1024LP59773 190 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms