RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CCT8L2Q96SF2 557 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 ERVK-6Q9BXR3 956 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 COQ10BQ9H8M1 238 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 ECT2Q9H8V3 914 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 TRPV5Q9NQA5 729 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 C1orf123Q9NWV4 160 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 HPF1Q9NWY4 346 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 FAM120CQ9NX05 1096 aaKnown RBP2.71□□□□□ -1.98
VPS41-207ENST00000439468 UTP6Q9NYH9 597 aaKnown RBP2.71□□□□□ -1.98
VPS41-207ENST00000439468 ZNF490Q9ULM2 529 aaPredicted RBP2.71□□□□□ -1.98
VPS41-207ENST00000439468 MGAT4BQ9UQ53 548 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 AURKCQ9UQB9 309 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.71□□□□□ -1.98
VPS41-207ENST00000439468 GRIN2AQ12879 1464 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 GRIN2BQ13224 1484 aa2.71□□□□□ -1.98
VPS41-207ENST00000439468 ADAMTS12P58397 1594 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 WIZO95785 1651 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 EPRSP07814 1512 aaKnown RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 NPIPA5A0A0B4J1W7 369 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 NPIPA5E9PKD4 350 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 E9PMD0 336 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 C11orf98E9PRG8 122 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 F8WDY8 70 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 SGK494L7N484 410 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ALOX15BO15296 676 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 SH3BGRLO75368 114 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 OR4F21O95013 312 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 NDUFA7O95182 113 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 AK1P00568 194 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 HPP00738 406 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 SLC35G4P0C7Q5 338 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 PVRP15151 417 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 AZU1P20160 251 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 CCND2P30279 289 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ADRA1AP35348 466 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ELK3P41970 407 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 PRKCEQ02156 737 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 HSF2Q03933 536 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ZP4Q12836 540 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RUNX3Q13761 415 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 SLC10A1Q14973 349 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RAB35Q15286 201 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ZIC1Q15915 447 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 USH1GQ495M9 461 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 SLX4IPQ5VYV7 408 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 BTNL3Q6UXE8 466 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 STOX1Q6ZVD7 989 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 NET1Q7Z628 596 aaPredicted RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 HPS6Q86YV9 775 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 GRAMD2AQ8IUY3 354 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 UNC5CLQ8IV45 518 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 TYMSOSQ8TAI1 123 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 TBCKQ8TEA7 893 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 U2AF1L4Q8WU68 220 aaKnown RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 RSPH1Q8WYR4 309 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RBM18Q96H35 190 aaKnown RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 TSPAN18Q96SJ8 248 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 C19orf43Q9BQ61 176 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 CARD6Q9BX69 1037 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 TRIM9Q9C026 710 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ZBP1Q9H171 429 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 DPH5Q9H2P9 285 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RHOJQ9H4E5 214 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 GPN2Q9H9Y4 310 aaPredicted RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 CALHM2Q9HA72 323 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 PALMDQ9NP74 551 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RBM28Q9NW13 759 aaKnown RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 DUS2Q9NX74 493 aaKnown RBP2.7□□□□□ -1.98
VPS41-207ENST00000439468 ANKMY1Q9P2S6 941 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 CHRNA9Q9UGM1 479 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 TP53TG3Q9ULZ0 132 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 KIAA0556O60303 1618 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 ABCA5Q8WWZ7 1642 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 GON4LQ3T8J9 2241 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
VPS41-207ENST00000439468 RALGAPA1Q6GYQ0 2036 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 IGHV3OR16-12A0A075B7B8 117 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 NPIPA2E9PIF3 369 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 SRSF10O75494 262 aaKnown RBP2.69□□□□□ -1.98
VPS41-207ENST00000439468 KBTBD11O94819 623 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 HPDP32754 393 aaPredicted RBP2.69□□□□□ -1.98
VPS41-207ENST00000439468 TRPC1P48995 793 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 RPS6P62753 249 aaKnown RBP2.69□□□□□ -1.98
VPS41-207ENST00000439468 PPIAP62937 165 aaKnown RBP2.69□□□□□ -1.98
VPS41-207ENST00000439468 NUCB2P80303 420 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 KLHL30Q0D2K2 578 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 PDZK1IP1Q13113 114 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 EIF2B1Q14232 305 aaKnown RBP2.69□□□□□ -1.98
VPS41-207ENST00000439468 UBE2V2Q15819 145 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 CDKN3Q16667 212 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 ASPHD2Q6ICH7 369 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 SULT1C3Q6IMI6 304 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 LEG1Q6P5S2 330 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 ZNF600Q6ZNG1 722 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 ADCK1Q86TW2 530 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 ERC1Q8IUD2 1116 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 EFCAB13Q8IY85 973 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 GCNT2Q8N0V5 402 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 FNDC8Q8TC99 324 aa2.69□□□□□ -1.98
VPS41-207ENST00000439468 C18orf25Q96B23 403 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms