RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TOR1AIP2Q8NFQ8 470 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 OR6C4Q8NGE1 309 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 POLE3Q9NRF9 147 aa23.95■■□□□ 1.42
CPNE1-216ENST00000437340 CNOT2Q9NZN8 540 aaKnown RBP23.95■■□□□ 1.42
CPNE1-216ENST00000437340 OR10H2O60403 315 aa23.94■■□□□ 1.42
CPNE1-216ENST00000437340 DBIP07108 87 aaKnown RBP23.94■■□□□ 1.42
CPNE1-216ENST00000437340 CSNK1EP49674 416 aaKnown RBP23.94■■□□□ 1.42
CPNE1-216ENST00000437340 C21orf59P57076 290 aa23.94■■□□□ 1.42
CPNE1-216ENST00000437340 YIPF6Q96EC8 236 aa23.94■■□□□ 1.42
CPNE1-216ENST00000437340 Q96MT0 163 aa23.94■■□□□ 1.42
CPNE1-216ENST00000437340 DUSP15Q9H1R2 295 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-216ENST00000437340 PDE7BQ9NP56 450 aa23.94■■□□□ 1.42
CPNE1-216ENST00000437340 A0A087WUU8 490 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 EFCAB10A6NFE3 127 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 RHPN2P1A8MT19 583 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CTNSO60931 367 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 GABARAPO95166 117 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 OR5F1O95221 314 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 AVPR1BP47901 424 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 AFF3P51826 1226 aaKnown RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 EEF1A1P68104 462 aaKnown RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 IGLV3-21P80748 117 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 WDR45BQ5MNZ6 344 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 ZNF836Q6ZNA1 936 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 TGM7Q96PF1 710 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 POLR2J2Q9GZM3 115 aaKnown RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 TNRC6BQ9UPQ9 1833 aaKnown RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 SPAG17Q6Q759 2223 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CCDC163A0A0D9SF12 145 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 HYKKA2RU49 373 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 FITM1A5D6W6 292 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 FRS3O43559 492 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 KIAA0513O60268 411 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 NKX2-2O95096 273 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 MED26O95402 600 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 SOX14O95416 240 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 ZBTB11O95625 1053 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CBX7O95931 251 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 PSMB9P28065 219 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 ALDH4A1P30038 563 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 TMEM201Q5SNT2 666 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CASP12Q6UXS9 341 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 GALNT12Q8IXK2 581 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 MAML2Q8IZL2 1156 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CARFQ8N187 725 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 GNPDA2Q8TDQ7 276 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 MCHR1Q99705 422 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 AMBNQ9NP70 447 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 C11orf16Q9NQ32 467 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 CTPS2Q9NRF8 586 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 SEMA4GQ9NTN9 838 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 SOHLH2Q9NX45 425 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 SLC6A14Q9UN76 642 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 DNAH14Q0VDD8 3507 aa23.93■■□□□ 1.42
CPNE1-216ENST00000437340 ZDBF2Q9HCK1 2354 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 CPSF4LA6NMK7 179 aaKnown RBP23.92■■□□□ 1.42
CPNE1-216ENST00000437340 LAMTOR5O43504 91 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 GUSBP08236 651 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 CDK4P11802 303 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 NUDT6P53370 316 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 EMP3P54852 163 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 GFERP55789 205 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 POU6F2P78424 691 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-216ENST00000437340 COL9A2Q14055 689 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-216ENST00000437340 EXOSC7Q15024 291 aaKnown RBP23.92■■□□□ 1.42
CPNE1-216ENST00000437340 PLEKHM3Q6ZWE6 761 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 STX19Q8N4C7 294 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 OR8J1Q8NGP2 316 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 GPR151Q8TDV0 419 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 UCKL1Q9NWZ5 548 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 HCN3Q9P1Z3 774 aa23.92■■□□□ 1.42
CPNE1-216ENST00000437340 IGHV5-51A0A0C4DH38 117 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 CLDN4O14493 209 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 BCAT2O15382 392 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 SDC3O75056 442 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 BCAS1O75363 584 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 PIPP12273 146 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 C21orf33P30042 268 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 TRHRP34981 398 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 SLC13A2Q13183 592 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 GPR68Q15743 365 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 CTF1Q16619 201 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 DECR1Q16698 335 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 CCNJQ5T5M9 372 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 WDR5BQ86VZ2 330 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 TMEM105Q8N8V8 129 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 C9orf43Q8TAL5 461 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 DOK4Q8TEW6 326 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 EVA1AQ9H8M9 152 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 GPR83Q9NYM4 423 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 M0R129 80 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 BCL10O95999 233 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 IGFBP1P08833 259 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 NID1P14543 1247 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 TNNI3P19429 210 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 S1PR1P21453 382 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 PPM1FP49593 454 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 STX4Q12846 297 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 ZNF730Q6ZMV8 503 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 B3GNT7Q8NFL0 401 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms