RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 SLC35A4Q96G79 324 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 ELF4Q99607 663 aaPredicted RBP11.15□□□□□ -0.62
CTCFL-209ENST00000433949 PRRG3Q9BZD7 231 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 WDR12Q9GZL7 423 aaKnown RBP11.15□□□□□ -0.62
CTCFL-209ENST00000433949 SLC25A19Q9HC21 320 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 SUSD2Q9UGT4 822 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 C19orf53Q9UNZ5 99 aaPredicted RBP11.15□□□□□ -0.62
CTCFL-209ENST00000433949 SATB2Q9UPW6 733 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 RPL36Q9Y3U8 105 aaKnown RBP11.15□□□□□ -0.62
CTCFL-209ENST00000433949 CACNA1EQ15878 2313 aa11.15□□□□□ -0.62
CTCFL-209ENST00000433949 EFCAB9A8MZ26 197 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 CLDN25C9JDP6 229 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 AP3D1O14617 1153 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 AIREO43918 545 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 PLOD3O60568 738 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 CYP7B1O75881 506 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 PIAS2O75928 621 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 AK1P00568 194 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 EIF2S1P05198 315 aaKnown RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 RPLP0P05388 317 aaKnown RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 THBS1P07996 1170 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 MMP11P24347 488 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 ALDH4A1P30038 563 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 UGT2B10P36537 528 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 PPM1FP49593 454 aaPredicted RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 VBP1P61758 197 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 SIM1P81133 766 aaPredicted RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 FOXD4Q12950 439 aaPredicted RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF628Q5EBL2 1059 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 C6orf132Q5T0Z8 1188 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 NIPAL1Q6NVV3 410 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 C16orf87Q6PH81 154 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 FAM111BQ6SJ93 734 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 RRM2BQ7LG56 351 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 ZER1Q7Z7L7 766 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 SLC25A45Q8N413 288 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 CSNK1A1LQ8N752 337 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 DYNC2LI1Q8TCX1 351 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 ZHX1-C8orf76Q96EF9 292 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 CCDC3Q9BQI4 270 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 POLDIP3Q9BY77 421 aaKnown RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.63
CTCFL-209ENST00000433949 PIGUQ9H490 435 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 B3GNT3Q9Y2A9 372 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 WDR45Q9Y484 360 aa11.15□□□□□ -0.63
CTCFL-209ENST00000433949 SNTNA6NMZ2 147 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 FOXD2O60548 495 aaPredicted RBP11.14□□□□□ -0.63
CTCFL-209ENST00000433949 GALR3O60755 368 aaPredicted RBP11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SOX14O95416 240 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 GPR75O95800 540 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF12P17014 697 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 LIPAP38571 399 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 ARRB1P49407 418 aaPredicted RBP11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SMSP52788 366 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
CTCFL-209ENST00000433949 DUSP8Q13202 625 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 ZNF846Q147U1 533 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 NCF4Q15080 339 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 RNLSQ5VYX0 342 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 FRRS1Q6ZNA5 592 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SLC46A3Q7Z3Q1 461 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 GKN2Q86XP6 184 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 NLGN4XQ8N0W4 816 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 FAM26EQ8N5C1 309 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 CDRT4Q8N9R6 151 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 GNPDA2Q8TDQ7 276 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SLC9A6Q92581 669 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 DIO2Q92813 273 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 PLEKHA8Q96JA3 519 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 STACQ99469 402 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SEMA6CQ9H3T2 930 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 GAREM1Q9H706 876 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 DUSP22Q9NRW4 184 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 POMT2Q9UKY4 750 aa11.14□□□□□ -0.63
CTCFL-209ENST00000433949 M0R082 166 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 CYR61O00622 381 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TPST2O60704 377 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 NADKO95544 446 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TP53P04637 393 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 TNNI3P19429 210 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 LSSP48449 732 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 GIPRP48546 466 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 PDX1P52945 283 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 SHBQ15464 509 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 SYT16Q17RD7 645 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 MFSD4BQ5TF39 518 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 OLIG3Q7RTU3 272 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 DGLUCYQ7Z3D6 616 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 VRK2Q86Y07 508 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 NDNFQ8TB73 568 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 CDS1Q92903 461 aa11.13□□□□□ -0.63
CTCFL-209ENST00000433949 SH3YL1Q96HL8 342 aaPredicted RBP11.13□□□□□ -0.63
CTCFL-209ENST00000433949 EVA1AQ9H8M9 152 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms