RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 IQCHQ86VS3 1027 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 COMTD1Q86VU5 262 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 CDRT4Q8N9R6 151 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 SLC16A11Q8NCK7 471 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 SLC9A6Q92581 669 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 ZHX1-C8orf76Q96EF9 292 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 TMEM80Q96HE8 168 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 PLEKHA8Q96JA3 519 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 TEX12Q9BXU0 123 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 PRRG3Q9BZD7 231 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 WDR12Q9GZL7 423 aaKnown RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 KRCC1Q9NPI7 259 aaPredicted RBP11.98□□□□□ -0.49
DDX56-204ENST00000431640 SATB2Q9UPW6 733 aa11.98□□□□□ -0.49
DDX56-204ENST00000431640 IRGMA1A4Y4 181 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CLDN25C9JDP6 229 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 FAM227AF5H4B4 570 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CYR61O00622 381 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 ENTPD6O75354 484 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 OR5F1O95221 314 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 NADKO95544 446 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 TP53P04637 393 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 ADORA3P0DMS8 318 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 PVRP15151 417 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CSTF2P33240 577 aaKnown RBP eCLIP11.97□□□□□ -0.49
DDX56-204ENST00000431640 LIPAP38571 399 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 STAT5AP42229 794 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 PDX1P52945 283 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 RAB38P57729 211 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 RGS8P57771 180 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 VSX2P58304 361 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 RHAGQ02094 409 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 TSPAN31Q12999 210 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 GINS1Q14691 196 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 ELOCQ15369 112 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 LPAL2Q16609 132 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 GON4LQ3T8J9 2241 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 TIMM50Q3ZCQ8 353 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 ARMCX4Q5H9R4 360 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 FHL5Q5TD97 284 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 MFSD4BQ5TF39 518 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 FAM111BQ6SJ93 734 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 FRRS1Q6ZNA5 592 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 USP43Q70EL4 1123 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 OLIG3Q7RTU3 272 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 DGLUCYQ7Z3D6 616 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 SFTPA2Q8IWL1 248 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 OR4N5Q8IXE1 308 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 NLGN4XQ8N0W4 816 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CA13Q8N1Q1 262 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 PIGXQ8TBF5 258 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 FNDC8Q8TC99 324 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CDS1Q92903 461 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 SH3YL1Q96HL8 342 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 ZC3H10Q96K80 434 aaKnown RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 SDF2Q99470 211 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 ARMC7Q9H6L4 198 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 UCK1Q9HA47 277 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 POLE3Q9NRF9 147 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 DUSP22Q9NRW4 184 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 NLGN3Q9NZ94 848 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 SELENONQ9NZV5 590 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 POMT2Q9UKY4 750 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 CLCA2Q9UQC9 943 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
DDX56-204ENST00000431640 R4GN57 208 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 NINQ8N4C6 2090 aa11.97□□□□□ -0.49
DDX56-204ENST00000431640 A0A087WUU8 490 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 FCMRO60667 390 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 TPST2O60704 377 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 STX11O75558 287 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 SOX14O95416 240 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 DBIP07108 87 aaKnown RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 NT5EP21589 574 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 CDH3P22223 829 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 PCYT1AP49585 367 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 NXPH1P58417 271 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 LSM3P62310 102 aaKnown RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 NR1D2Q14995 579 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 SYT16Q17RD7 645 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 KLHL22Q53GT1 634 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 EXOSC6Q5RKV6 272 aaKnown RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 PEAR1Q5VY43 1037 aaPredicted RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 TYW3Q6IPR3 259 aaKnown RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 ZNF730Q6ZMV8 503 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 RASSF6Q6ZTQ3 369 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 GKN2Q86XP6 184 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 TCEANCQ8N8B7 351 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 TEX47Q8TBZ9 253 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 ACOT11Q8WXI4 607 aaPredicted RBP11.96□□□□□ -0.49
DDX56-204ENST00000431640 DIO2Q92813 273 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 ZG16BQ96DA0 208 aa11.96□□□□□ -0.49
DDX56-204ENST00000431640 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms