RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 NR1H2P55055 460 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 CLDN20P56880 219 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 TRA2BP62995 288 aaKnown RBP16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 PSPHP78330 225 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 STX5Q13190 355 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 PPP4R4Q6NUP7 873 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 RPS27LQ71UM5 84 aaKnown RBP16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 PLD6Q8N2A8 252 aaKnown RBP16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 FADS6Q8N9I5 356 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR2M3Q8NG83 312 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR4N2Q8NGD1 307 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 IGFBPL1Q8WX77 278 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 ERP27Q96DN0 273 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 HBEGFQ99075 208 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 BRF2Q9HAW0 419 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF701Q9NV72 531 aaPredicted RBP16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 NMRK1Q9NWW6 199 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 MED11Q9P086 117 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 SNX6Q9UNH7 406 aa16.47■□□□□ 0.23
UPK3BP1-201ENST00000428678 OR2M5A3KFT3 312 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 KLF4O43474 513 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 THBDP07204 575 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 RBP1P09455 135 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 PAX1P15863 534 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 CAV1Q03135 178 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 ZNF155Q12901 538 aaPredicted RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 TNK1Q13470 666 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 GANABQ14697 944 aaKnown RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 FAM219BQ5XKK7 198 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 LETMD1Q6P1Q0 360 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 FAM214BQ7L5A3 538 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 NANOS1Q8WY41 292 aaKnown RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 EXOSC8Q96B26 276 aaKnown RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 STMN4Q9H169 189 aaPredicted RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 KCNF1Q9H3M0 494 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 SENP1Q9P0U3 644 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 TMCO1Q9UM00 188 aa16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
UPK3BP1-201ENST00000428678 OTCP00480 354 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 PLAUP00749 431 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 IL3P08700 152 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 FCGR2AP12318 317 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 PPP3CBP16298 524 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 TSPAN8P19075 237 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 RPS3AP61247 264 aaKnown RBP16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 KRTAP1-1Q07627 177 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 DMTNQ08495 405 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 C2orf54Q08AI8 447 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 GUSBP1Q15486 140 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 SGCBQ16585 318 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 SH2D4BQ5SQS7 431 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 MAPK1IP1LQ8NDC0 245 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 GFM2Q969S9 779 aaKnown RBP16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 MTBPQ96DY7 904 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 PTGES2Q9H7Z7 377 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 SDHAF3Q9NRP4 125 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 GIMAP4Q9NUV9 329 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 XPR1Q9UBH6 696 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 VPS29Q9UBQ0 182 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 EMC9Q9Y3B6 208 aa16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 ANK3Q12955 4377 aaKnown RBP16.45■□□□□ 0.22
UPK3BP1-201ENST00000428678 LINC01387J3KSC0 135 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 PPP6CO00743 305 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 HS3ST1O14792 307 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 AQP8O94778 261 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 CTAGE8P0CG41 777 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 SH2D5Q6ZV89 423 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 WFDC8Q8IUA0 241 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 CTAGE4Q8IX94 777 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 SAMD14Q8IZD0 417 aaPredicted RBP16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 SPATA4Q8NEY3 305 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 OR7G2Q8NG99 324 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 UHMK1Q8TAS1 419 aaKnown RBP16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 PLPPR2Q96GM1 343 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 PRRG4Q9BZD6 226 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 TAS2R9Q9NYW1 312 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 FLRT3Q9NZU0 649 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 MCM8Q9UJA3 840 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 CLEC4AQ9UMR7 237 aa16.44■□□□□ 0.22
UPK3BP1-201ENST00000428678 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 RNF223E7ERA6 249 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 PCDH7O60245 1069 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 FADS1O60427 444 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 PLOD3O60568 738 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 TMCC2O75069 709 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 PLGP00747 810 aaPredicted RBP16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 RPS17P08708 135 aaKnown RBP16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 CDH13P55290 713 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 CTBP2P56545 445 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 GUCY2DQ02846 1103 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 VEZF1Q14119 521 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 CAPRIN1Q14444 709 aaKnown RBP16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 TRADDQ15628 312 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 LGSNQ5TDP6 509 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 ZDHHC24Q6UX98 284 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 FAM9CQ8IZT9 166 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 METTL25Q8N6Q8 603 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 ZNF611Q8N823 705 aa16.43■□□□□ 0.22
UPK3BP1-201ENST00000428678 ZNF483Q8TF39 744 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms