RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LRIG3Q6UXM1 1119 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZNF781Q8N8C0 355 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ABTB1Q969K4 478 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZBED6CLQ96FA7 236 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 SORT1Q99523 831 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 CENPHQ9H3R5 247 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 SIRT3Q9NTG7 399 aaPredicted RBP16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 CACNA1DQ01668 2161 aa16.68■□□□□ 0.26
SMARCAL1-205ENST00000425815 TMEM114B3SHH9 223 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 SCAMP2O15127 329 aaKnown RBP16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 EPPINO95925 133 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 GRK2P25098 689 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 EVI2BP34910 448 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZFP36L2P47974 494 aaKnown RBP16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 PRKAG1P54619 331 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 GFRA1P56159 465 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 MLC1Q15049 377 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 ATP6AP1LQ52LC2 224 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 EXOSC6Q5RKV6 272 aaKnown RBP16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 RIPPLY2Q5TAB7 128 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 RIMKLAQ8IXN7 391 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 KRTCAP2Q8N6L1 136 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 FNDC5Q8NAU1 212 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 NAXEQ8NCW5 288 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 NUP43Q8NFH3 380 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 PIK3R3Q92569 461 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 COQ8BQ96D53 544 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 C16orf58Q96GQ5 468 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 Q9N2J8 555 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 EQTNQ9NQ60 294 aa16.67■□□□□ 0.26
SMARCAL1-205ENST00000425815 LRBAP50851 2863 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 NKX2-2O95096 273 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 HSPA4LO95757 839 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 BGNP21810 368 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 CEACAM8P31997 349 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 GPC1P35052 558 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 DECR1Q16698 335 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 BEND6Q5SZJ8 279 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 POMZP3Q6PJE2 187 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 APOOLQ6UXV4 268 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 DCHS2Q6V1P9 2916 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 R3HCC1LQ7Z5L2 792 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 FADS6Q8N9I5 356 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 TNIP2Q8NFZ5 429 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZFP28Q8NHY6 868 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 PPP1R14CQ8TAE6 165 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 FAM110BQ8TC76 370 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 TUBGCP3Q96CW5 907 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 KCNK9Q9NPC2 374 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 KCNJ16Q9NPI9 418 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 HAO1Q9UJM8 370 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 MRPS18CQ9Y3D5 142 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 APCP25054 2843 aa16.66■□□□□ 0.26
SMARCAL1-205ENST00000425815 TTC36A6NLP5 189 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 EMC8O43402 210 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZWINTO95229 277 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 ACTL6AO96019 429 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 ACP2P11117 423 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 G6PDP11413 515 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 CPN1P15169 458 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 MSX1P28360 303 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 MAPK1P28482 360 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 SRD5A2P31213 254 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 SLC1A6P48664 564 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 STARP49675 285 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 WDR4P57081 412 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 B3GALT5-AS1P59052 145 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 MRPS22P82650 360 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 EMX2Q04743 252 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 ZNHIT3Q15649 155 aaPredicted RBP16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 TRIM42Q8IWZ5 723 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 PM20D2Q8IYS1 436 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 CDRT4Q8N9R6 151 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 SLC16A11Q8NCK7 471 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 OR14L1PQ8NHC6 308 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 CEP70Q8NHQ1 597 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 FAM120BQ96EK7 910 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 RUBCNLQ9H714 662 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 TAS2R10Q9NYW0 307 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 CAMK2AQ9UQM7 478 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 RAP2CQ9Y3L5 183 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 EXPH5Q8NEV8 1989 aa16.65■□□□□ 0.26
SMARCAL1-205ENST00000425815 A0A1W2PRB8 838 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 SCO2O43819 266 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 UTS2O95399 124 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 TIMP3P35625 211 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 RPL14P50914 215 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 PDCD2Q16342 344 aaPredicted RBP16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 NSUN5P2Q63ZY6 315 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 MFSD12Q6NUT3 480 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 MEX3BQ6ZN04 569 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 ZAR1Q86SH2 424 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 MARCH3Q86UD3 253 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 OR2M3Q8NG83 312 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 PSMA8Q8TAA3 256 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 GPR151Q8TDV0 419 aa16.64■□□□□ 0.25
SMARCAL1-205ENST00000425815 RMND5BQ96G75 393 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms