RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ETS2P15036 469 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NCK1P16333 377 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 GOT1P17174 413 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ENGP17813 658 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CD82P27701 267 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PDHA2P29803 388 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 HNRNPH3P31942 346 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CBSP35520 551 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 AVPR1AP37288 418 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 APOBEC1P41238 236 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 TMPOP42166 694 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MATKP42679 507 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SLC1A4P43007 532 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ACADSBP45954 432 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SOX2P48431 317 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NPY2RP49146 381 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PSMD4P55036 377 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 UBE2G2P60604 165 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MRPS25P82663 173 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CHRNB3Q05901 458 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 RAD51Q06609 339 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SNTA1Q13424 505 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PEX6Q13608 980 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SRSF7Q16629 238 aaKnown RBP eCLIP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ACSF3Q4G176 576 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ALG10Q5BKT4 473 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ALG10BQ5I7T1 473 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 RTL6Q6ICC9 239 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ANKRD54Q6NXT1 300 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CDC42EP5Q6NZY7 148 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 DUS1LQ6P1R4 473 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NAPRTQ6XQN6 538 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 DCDC5Q6ZRR9 648 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NCCRP1Q6ZVX7 275 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 USP50Q70EL3 339 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MRPL21Q7Z2W9 205 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 COMMD2Q86X83 199 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PTOV1Q86YD1 416 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 TBC1D10CQ8IV04 446 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MMAAQ8IVH4 418 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ARHGAP18Q8N392 663 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SLC5A8Q8N695 610 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 Q8N9G6 341 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 KBTBD3Q8NAB2 608 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 NECAP1Q8NC96 275 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 FBXO36Q8NEA4 188 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 STXBP6Q8NFX7 210 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SEMA6DQ8NFY4 1073 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OR2L3Q8NG85 312 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OR4K1Q8NGD4 311 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OR13C3Q8NGS6 347 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OR52I2Q8NH67 350 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 HTR3CQ8WXA8 447 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 GTF2H4Q92759 462 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 TSACCQ96A04 125 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 C8orf44Q96CB5 159 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OTUB2Q96DC9 234 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MRPL53Q96EL3 112 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SNF8Q96H20 258 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MED30Q96HR3 178 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 IGSF21Q96ID5 467 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CXorf58Q96LI9 332 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 IL4I1Q96RQ9 567 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 P2RY13Q9BPV8 354 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SDCBP2Q9H190 292 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 OR2AG1Q9H205 316 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 LRRN3Q9H3W5 708 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 IL1RL2Q9HB29 575 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PHPT1Q9NRX4 125 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 TREX1Q9NSU2 369 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 ELOVL2Q9NXB9 296 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SLC17A7Q9P2U7 560 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 GNG12Q9UBI6 72 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MIOXQ9UGB7 285 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SLC12A6Q9UHW9 1150 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 SAMHD1Q9Y3Z3 626 aaKnown RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 LOXL2Q9Y4K0 774 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 RNF115Q9Y4L5 304 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 RIPK3Q9Y572 518 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 MAP3K15Q6ZN16 1313 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 POLR3AO14802 1390 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-205ENST00000424674 CCDC7Q96M83 1385 aa3.36□□□□□ -1.87
SF3B1-205ENST00000424674 KBTBD11-OT1A0A1B0GTJ5 212 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 A0A1W2PPE3 182 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 A6NNC1 897 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 FAM90A26D6RGX4 464 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 E5RGE8 158 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 RNASEK-C17orf49H0YIS7 233 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TEX46H3BTG2 121 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 H7C1Q1 480 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 SMIM22K7EJ46 135 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TRAFD1O14545 582 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 LIN7AO14910 233 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-205ENST00000424674 CLOCKO15516 846 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 TSPAN2O60636 221 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 OR2J3O76001 311 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 NEURL1O76050 574 aa3.35□□□□□ -1.87
SF3B1-205ENST00000424674 AP2A2O94973 939 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms