RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ATG2BQ96BY7 2078 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR6C76A6NM76 312 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CCDC188H7C350 402 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SERPINB7O75635 380 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SERPING1P05155 500 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KRT8P05787 483 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF43P17038 809 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 AK4P27144 223 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CEACAM3P40198 252 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PIK3CBP42338 1070 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HTR3AP46098 478 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 STK19P49842 368 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 S100A12P80511 92 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RBBP4Q09028 425 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ITGB3BPQ13352 177 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NAB1Q13506 487 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CLINT1Q14677 625 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MAD2L1BPQ15013 274 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ARMC4Q5T2S8 1044 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ANXA8L1Q5VT79 327 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SEL1L3Q68CR1 1132 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NET1Q7Z628 596 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RANBP3LQ86VV4 465 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NATD1Q8N6N6 113 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PPCDCQ96CD2 204 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TBATAQ96M53 351 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CHP1Q99653 195 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OSBPL11Q9BXB4 747 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CXCL16Q9H2A7 254 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 IL17CQ9P0M4 197 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HMGXB4Q9UGU5 601 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RNF150Q9ULK6 438 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SH3GLB1Q9Y371 365 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 USP3Q9Y6I4 520 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CACNA1BQ00975 2339 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CLCA1A8K7I4 914 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ERI2A8K979 691 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 AHRRA9YTQ3 701 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PJA2O43164 708 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FAM20BO75063 409 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TSPAN9O75954 239 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 IFNA21P01568 189 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 IFNA17P01571 189 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NR0B1P51843 470 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 DAOAP59103 153 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GSG1Q2KHT4 349 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SPATS1Q496A3 300 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CES3Q6UWW8 571 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MAMSTRQ6ZN01 415 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 DPPA4Q7L190 304 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TAC4Q86UU9 113 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SATL1Q86VE3 508 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SULF2Q8IWU5 870 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SHISA5Q8N114 240 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RFLNBQ8N5W9 214 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 BCAS4Q8TDM0 211 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SELENOMQ8WWX9 145 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HSD17B8Q92506 261 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KAT5Q92993 513 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 C9orf72Q96LT7 481 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MBOAT7Q96N66 472 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF607Q96SK3 696 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SH3BGRL3Q9H299 93 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CCM2LQ9NUG4 571 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR6C2Q9NZP2 312 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 AMACRQ9UHK6 382 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 LIPT1Q9Y234 373 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PLEKHM1Q9Y4G2 1056 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PCDHGB1Q9Y5G3 927 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FADS3Q9Y5Q0 445 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM150BA6NC51 233 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR52A4PA6NMU1 304 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM229AB2RXF0 380 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RNF103O00237 685 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NDUFB3O43676 98 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SNAP91O60641 907 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RPS2P15880 293 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SSTR1P30872 391 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 THBS2P35442 1172 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PLAURQ03405 335 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MFGE8Q08431 387 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MGAT3Q09327 533 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SGCAQ16586 387 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SAMD4BQ5PRF9 694 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MISPQ8IVT2 679 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SERPINA12Q8IW75 414 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FOXRED2Q8IWF2 684 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SFTPA2Q8IWL1 248 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SFTPA1Q8IWL2 248 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 UEVLDQ8IX04 471 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SUMF1Q8NBK3 374 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR9A1PQ8NGU1 263 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR4L1Q8NH43 312 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ASB12Q8WXK4 309 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HAS2Q92819 552 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SEMA4DQ92854 862 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MYRFLQ96LU7 910 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KCNJ15Q99712 375 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms