RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 PAQR7Q86WK9 346 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CRLF3Q8IUI8 442 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 RCOR2Q8IZ40 523 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TAGAPQ8N103 731 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 EID3Q8N140 333 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 C2orf73Q8N5S3 287 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 DNAAF3Q8N9W5 541 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TMEM178AQ8NBL3 297 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CHDHQ8NE62 594 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR13J1Q8NGT2 312 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 FAM57AQ8TBR7 257 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 M1APQ8TC57 530 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ACTL9Q8TC94 416 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CA5BP1Q8WTZ4 195 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ASZ1Q8WWH4 475 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ASB5Q8WWX0 329 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 KAT2AQ92830 837 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 RAD51AP1Q96B01 352 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 HAUS1Q96CS2 278 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 MMABQ96EY8 250 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 OR2A5Q96R48 311 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 CYTH2Q99418 400 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 IFT27Q9BW83 186 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 HES7Q9BYE0 225 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 VN1R1Q9GZP7 353 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 C10orf88Q9H8K7 445 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 MMP25Q9NPA2 562 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 COQ3Q9NZJ6 369 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SH3BP4Q9P0V3 963 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 SPATA7Q9P0W8 599 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 STOX2Q9P2F5 926 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 TRPC4Q9UBN4 977 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 HAO1Q9UJM8 370 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 NPIPA1Q9UND3 350 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 HYOU1Q9Y4L1 999 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 ALG6Q9Y672 507 aa4.28□□□□□ -1.72
CDC42EP3-202ENST00000422687 GTF3C1Q12789 2109 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 A0A0U1RQJ8 604 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 OR51F1A6NGY5 319 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 FAM157AC9JC47 383 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 USP17L23D6RBM5 183 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 NPIPB11E5RHQ5 1161 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 H0YIG0 161 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 H7C0C1 242 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 TXNDC9O14530 226 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 TP73O15350 636 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ZNHIT1O43257 154 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 SPOPO43791 374 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 KLK8O60259 260 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 NME2P1O60361 137 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 CTAG2O75638 210 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ZNF189O75820 626 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 IPO7O95373 1038 aaKnown RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 LCKP06239 509 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 APOA4P06727 396 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 NHLRC4P0CG21 123 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ABOP16442 354 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 GABRB1P18505 474 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 TFEBP19484 476 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 EEF1DP29692 281 aaKnown RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 RYKP34925 604 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 PTGER1P34995 402 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ATP5OP48047 213 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 MARCKSL1P49006 195 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HMGA2P52926 109 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HSF1Q00613 529 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HSPA14Q0VDF9 509 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 PTK6Q13882 451 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 FASTKQ14296 549 aaKnown RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 FRG1Q14331 258 aaKnown RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 POU6F1Q14863 301 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 EXT1Q16394 746 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HIST2H2ACQ16777 129 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 SYT16Q17RD7 645 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 PARP6Q2NL67 630 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HKDC1Q2TB90 917 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ODF2Q5BJF6 829 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 CES4AQ5XG92 561 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 FCRLBQ6BAA4 426 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 TMEM211Q6ICI0 200 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 SPINK14Q6IE38 97 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 LRRC8BQ6P9F7 803 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 C3P1Q6ZMU1 363 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ZNF627Q7L945 461 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 GALNTL5Q7Z4T8 443 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 ANKRD37Q7Z713 158 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 GPAT4Q86UL3 456 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 CDKL3Q8IVW4 592 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 C17orf53Q8N3J3 647 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 CSNK1A1LQ8N752 337 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 HORMAD2Q8N7B1 307 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 POGLUT1Q8NBL1 392 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 PLPP5Q8NEB5 264 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 OR8K1Q8NGG5 319 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 C16orf52Q8NHV5 167 aa4.27□□□□□ -1.73
CDC42EP3-202ENST00000422687 BCAS4Q8TDM0 211 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms