RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 PXDNQ92626 1479 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
COL20A1-203ENST00000422202 FAAHO00519 579 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 CER1O95813 267 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 MVKQ03426 396 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 GPR155Q7Z3F1 870 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 OR51D1Q8NGF3 324 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SRRM3A6NNA2 597 aaPredicted RBP12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SC5DO75845 299 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
COL20A1-203ENST00000422202 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 ACSBG2Q5FVE4 666 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 DCAF4L2Q8NA75 395 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SCRN2Q96FV2 425 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SUCNR1Q9BXA5 334 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 LOC105369274A0A096LPK9 316 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 RAB27BO00194 218 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 PTPN6P29350 595 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 RPL23AP62750 156 aaKnown RBP12.88□□□□□ -0.35
COL20A1-203ENST00000422202 PLBD1Q6P4A8 553 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 OR4N4Q8N0Y3 316 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 SLC5A8Q8N695 610 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 PIGCQ92535 297 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 BMFQ96LC9 184 aa12.88□□□□□ -0.35
COL20A1-203ENST00000422202 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PTHP01270 115 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 FPR1P21462 350 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ADARB1P78563 741 aaKnown RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 SCAPQ12770 1279 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PTP4A2Q12974 167 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CNIH3Q8TBE1 160 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 TUBB1Q9H4B7 451 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 RPS10P5Q9NQ39 176 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 RFPL2O75678 378 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 NTSR1P30989 418 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ABHD18Q0P651 414 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 OPA3Q9H6K4 179 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 LIPT1Q9Y234 373 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PLEKHM1Q9Y4G2 1056 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 TRBV11-1A0A0K0K1C0 115 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 BTBD17A6NE02 478 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 SULT2B1O00204 365 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 NPPAP01160 153 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 NIPAL3Q6P499 406 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 METTL25Q8N6Q8 603 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 TUBA1CQ9BQE3 449 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 DOHHQ9BU89 302 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PPA2Q9H2U2 334 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ASCC3Q8N3C0 2202 aaKnown RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF44P15621 663 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 XCR1P46094 333 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ZNF718Q3SXZ3 478 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 KBTBD6Q86V97 674 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 OR52N2Q8NGI0 321 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 RNF128Q8TEB7 428 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CLEC4DQ8WXI8 215 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 C14orf119Q9NWQ9 140 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PLEK2Q9NYT0 353 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CSF2RAP15509 400 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 IL1RNP18510 177 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 DSC1Q08554 894 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 SLC35G1Q2M3R5 365 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 RNF186Q9NXI6 227 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 TGM1P22735 817 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 NIPA2Q8N8Q9 360 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 OR2T4Q8NH00 348 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 KIAA1191Q96A73 305 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 ULBP3Q9BZM4 244 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 SAV1Q9H4B6 383 aaPredicted RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 GPR52Q9Y2T5 361 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 HRH2P25021 359 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 NAT8LQ8N9F0 302 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
COL20A1-203ENST00000422202 CHEK1O14757 476 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 C5AR1P21730 350 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 PPP1R3AQ16821 1122 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 IL20RBQ6UXL0 311 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
COL20A1-203ENST00000422202 LMAN1LQ9HAT1 526 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
COL20A1-203ENST00000422202 TMEM9Q9P0T7 183 aa12.86□□□□□ -0.35
COL20A1-203ENST00000422202 LGALS13Q9UHV8 139 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms