RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 NPHS1O60500 1241 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 RCBTB2O95199 551 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 IFI6P09912 130 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 TMIGD3P0DMS9 266 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-208ENST00000417285 ALDH3A1P30838 453 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 DGKQP52824 942 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 GAS1P54826 345 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 SRYQ05066 204 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 SNTB1Q13884 538 aaKnown RBP22.99■■□□□ 1.27
VEGFA-208ENST00000417285 DECR1Q16698 335 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 WDR93Q6P2C0 686 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 ADGRE4PQ86SQ3 457 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 OR2L13Q8N349 312 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 C9orf106Q8NAJ2 232 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 OR4N2Q8NGD1 307 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 EFHD2Q96C19 240 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-208ENST00000417285 AMDHD1Q96NU7 426 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 EML4Q9HC35 981 aaKnown RBP22.99■■□□□ 1.27
VEGFA-208ENST00000417285 DDX18Q9NVP1 670 aaKnown RBP22.99■■□□□ 1.27
VEGFA-208ENST00000417285 DKKL1Q9UK85 242 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 FBXL2Q9UKC9 423 aa22.99■■□□□ 1.27
VEGFA-208ENST00000417285 TUBAL3A6NHL2 446 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 UPK1AO00322 258 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 ZIC3O60481 467 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 SLU7O95391 586 aaKnown RBP22.98■■□□□ 1.27
VEGFA-208ENST00000417285 DPP4P27487 766 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 LHX2P50458 406 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 DSCR4P56555 118 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-208ENST00000417285 GAB1Q13480 694 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 ZNHIT3Q15649 155 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-208ENST00000417285 KANK2Q63ZY3 851 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 OR5M10Q6IEU7 315 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 Q6ZSR9 355 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 OR4K17Q8NGC6 315 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 NINJ1Q92982 152 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 CAVIN3Q969G5 261 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 ELP4Q96EB1 424 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 EGLN2Q96KS0 407 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 SFXN2Q96NB2 322 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 CCT7Q99832 543 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 SFXN3Q9BWM7 321 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 CLEC4MQ9H2X3 399 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-208ENST00000417285 Q9N2J8 555 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 CBLCQ9ULV8 474 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 ABCG2Q9UNQ0 655 aa22.98■■□□□ 1.27
VEGFA-208ENST00000417285 A6NNC1 897 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 SPAG7O75391 227 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 LINC00032P0C843 101 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 EPXP11678 715 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 TACR1P25103 407 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 CLK3P49761 638 aaKnown RBP22.97■■□□□ 1.27
VEGFA-208ENST00000417285 ART1P52961 327 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 PSMD4P55036 377 aaKnown RBP22.97■■□□□ 1.27
VEGFA-208ENST00000417285 SORDQ00796 357 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 TCP10LQ8TDR4 215 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 FCRL1Q96LA6 429 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 MECRQ9BV79 373 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 TUBB1Q9H4B7 451 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 C3orf14Q9HBI5 128 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 PPP4R1LQ9P1A2 415 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 SLC17A7Q9P2U7 560 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 TMED5Q9Y3A6 229 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 DNAJC15Q9Y5T4 150 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 AKAP6Q13023 2319 aa22.97■■□□□ 1.27
VEGFA-208ENST00000417285 MED12Q93074 2177 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 CLCA1A8K7I4 914 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 EEF1E1-BLOC1S5C9J1V9 151 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 PDPK1O15530 556 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 EEF1E1O43324 174 aaKnown RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 FADS1O60427 444 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 PSMG1O95456 288 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 CHRNGP07510 517 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 FGF4P08620 206 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 ZNF708P17019 499 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 EVI2BP34910 448 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 STARP49675 285 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 AGFG1P52594 562 aaKnown RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 RPL38P63173 70 aaKnown RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 SH2D4BQ5SQS7 431 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 DDIASQ8IXT1 998 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 OR2T11Q8NH01 316 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 GOT1L1Q8NHS2 421 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 GFM2Q969S9 779 aaKnown RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 ZNF764Q96H86 408 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 GPATCH1Q9BRR8 931 aaKnown RBP22.96■■□□□ 1.27
VEGFA-208ENST00000417285 TRAF6Q9Y4K3 522 aa22.96■■□□□ 1.27
VEGFA-208ENST00000417285 LINC01387J3KSC0 135 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 LSM1O15116 133 aaKnown RBP22.95■■□□□ 1.26
VEGFA-208ENST00000417285 IL33O95760 270 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 SDC1P18827 310 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 CLDN18P56856 261 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 RIPPLY3P57055 190 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 ARL13AQ5H913 290 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-208ENST00000417285 CHMP1BQ7LBR1 199 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 TWIST2Q8WVJ9 160 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 LMF2Q9BU23 707 aaKnown RBP22.95■■□□□ 1.26
VEGFA-208ENST00000417285 PIGMQ9H3S5 423 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 REEP4Q9H6H4 257 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 PTGES2Q9H7Z7 377 aa22.95■■□□□ 1.26
VEGFA-208ENST00000417285 FAM120CQ9NX05 1096 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms