RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RGS19P49795 217 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 CDH6P55285 790 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 RAG2P55895 527 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 KRTAP10-11P60412 298 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 IL9RQ01113 521 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 RIGQ13278 110 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 GPR17Q13304 367 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SYCP1Q15431 976 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 CHRNA6Q15825 494 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ZNF74Q16587 644 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 SNAI3Q3KNW1 292 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 WLSQ5T9L3 541 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 LIN9Q5TKA1 542 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 AGAP7PQ5VUJ5 663 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ZNF425Q6IV72 752 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 RHBDD2Q6NTF9 364 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 KCTD8Q6ZWB6 473 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 MOB3BQ86TA1 216 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ISCA2Q86U28 154 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 FBXL14Q8N1E6 418 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 OR1L3Q8NH93 324 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 LNX1Q8TBB1 728 aaPredicted RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 APOBEC4Q8WW27 367 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 TMED6Q8WW62 240 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ELMO1Q92556 727 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 LHX4Q969G2 390 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SLC38A4Q969I6 547 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TM4SF19Q96DZ7 209 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 AGAP4Q96P64 663 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TECTBQ96PL2 329 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 CPXM1Q96SM3 734 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TTYH2Q9BSA4 534 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TUBGCP2Q9BSJ2 902 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 RPP25Q9BUL9 199 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 APOOQ9BUR5 198 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 TDRD1Q9BXT4 1180 aaKnown RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 RGCCQ9H4X1 137 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 NARFLQ9H6Q4 476 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SUDS3Q9H7L9 328 aaPredicted RBP4.28□□□□□ -1.72
LSM5-205ENST00000409952 AGPAT3Q9NRZ7 376 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ANAPC7Q9UJX3 599 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TBC1D24Q9ULP9 559 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 MYO6Q9UM54 1294 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 ABCG2Q9UNQ0 655 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SLC9A8Q9Y2E8 581 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 POLDIP2Q9Y2S7 368 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 MEMO1Q9Y316 297 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 TIMM10BQ9Y5J6 103 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 SELENOKQ9Y6D0 94 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 KIF27Q86VH2 1401 aa4.28□□□□□ -1.72
LSM5-205ENST00000409952 AFF2P51816 1311 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 SYNJ2O15056 1496 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 A0A0J9YVX5 310 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 hCG_38984A0A1B0GV85 526 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 LOC390937A0A1W2PQ73 354 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 HHLA1C9JL84 531 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ZNF701M0R085 212 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 LSM1O15116 133 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 CETN3O15182 167 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 STX11O75558 287 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 CLDN9O95484 217 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ECDO95905 644 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 PRSS2P07478 247 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ADORA3P0DMS8 318 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 MCF2P10911 925 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 H2AFXP16104 143 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 TNNI1P19237 187 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PGCP20142 388 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 MSR1P21757 451 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PRKACBP22694 351 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 GIFP27352 417 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 OTX1P32242 354 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 UGT1A5P35504 534 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 LEPRP48357 1165 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 PCYT1AP49585 367 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 HOXA1P49639 335 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 STARP49675 285 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 EFNB2P52799 333 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ATP1B3P54709 279 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ABCE1P61221 599 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 ITPK1Q13572 414 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 EZH2Q15910 746 aaKnown RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 MICBQ29980 383 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PLCXD3Q63HM9 321 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 C11orf87Q6NUJ2 197 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 TMEM53Q6P2H8 277 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 COLCA1Q6ZS62 124 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
LSM5-205ENST00000409952 DHDDSQ86SQ9 333 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 PIGZQ86VD9 579 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 NANOGP1Q8N7R0 232 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 ICA1LQ8NDH6 482 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 KBTBD8Q8NFY9 601 aa4.27□□□□□ -1.73
LSM5-205ENST00000409952 OR13F1Q8NGS4 319 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms