RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CASP12Q6UXS9 341 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 GALNT12Q8IXK2 581 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 METTL27Q8N6F8 245 aaPredicted RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 DIO2Q92813 273 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 RBM18Q96H35 190 aaKnown RBP19.29■□□□□ 0.68
USP39-203ENST00000409470 ZNF285Q96NJ3 590 aa19.29■□□□□ 0.68
USP39-203ENST00000409470 A0A087WUU8 490 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 TRIM64BA6NI03 449 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 CLDN4O14493 209 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 CTNSO60931 367 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 CBX7O95931 251 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 CDK1P06493 297 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 THBS1P07996 1170 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 C21orf33P30042 268 aaPredicted RBP19.28■□□□□ 0.68
USP39-203ENST00000409470 IFNGR2P38484 337 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 POU6F2P78424 691 aaPredicted RBP19.28■□□□□ 0.68
USP39-203ENST00000409470 NFATC3Q12968 1075 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ERV3-1Q14264 604 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 CD300LDQ6UXZ3 194 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ZNF730Q6ZMV8 503 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 RRM2BQ7LG56 351 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ANKRD13BQ86YJ7 626 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ZNF595Q8IYB9 648 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 STX19Q8N4C7 294 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ADAMTS18Q8TE60 1221 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 RIT1Q92963 219 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 FKBP10Q96AY3 582 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 IL4I1Q96RQ9 567 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 DUSP15Q9H1R2 295 aaPredicted RBP19.28■□□□□ 0.68
USP39-203ENST00000409470 GPN2Q9H9Y4 310 aaPredicted RBP19.28■□□□□ 0.68
USP39-203ENST00000409470 PRTFDC1Q9NRG1 225 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 FKBP14Q9NWM8 211 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 SELENONQ9NZV5 590 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 EPHA6Q9UF33 1036 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 ENPP5Q9UJA9 477 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 NTNG1Q9Y2I2 539 aa19.28■□□□□ 0.68
USP39-203ENST00000409470 SPTBP11277 2137 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 CENPVL1A0A0U1RR11 272 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 A0A1B0GVT2 93 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 SH3D21A4FU49 640 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 AK1P00568 194 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 DBIP07108 87 aaKnown RBP19.27■□□□□ 0.68
USP39-203ENST00000409470 NR4A1P22736 598 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 FNTBP49356 437 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 OR1D5P58170 312 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 ALDH6A1Q02252 535 aaKnown RBP19.27■□□□□ 0.68
USP39-203ENST00000409470 MAP4K2Q12851 820 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 UBALD2Q8IYN6 164 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 CD180Q99467 661 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 ALOXE3Q9BYJ1 711 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 SPRTNQ9H040 489 aaPredicted RBP19.27■□□□□ 0.68
USP39-203ENST00000409470 RAB33BQ9H082 229 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 PRDM6Q9NQX0 595 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 FBXO34Q9NWN3 711 aa19.27■□□□□ 0.68
USP39-203ENST00000409470 GXYLT2A0PJZ3 443 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 BLACEA4D250 179 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 LCKP06239 509 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 STSP08842 583 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 ATXN8OSP0DMR3 200 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 GSTM3P21266 225 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 EEF1A1P68104 462 aaKnown RBP19.27■□□□□ 0.67
USP39-203ENST00000409470 GPA33Q99795 319 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 ANKRD19PQ9H560 264 aa19.27■□□□□ 0.67
USP39-203ENST00000409470 NPIPA5A0A0B4J1W7 369 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 NPIPA7E9PJI5 369 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 TGFBR3LH3BV60 316 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 TP53P04637 393 aaPredicted RBP19.26■□□□□ 0.67
USP39-203ENST00000409470 NPIPA8P0DM63 369 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 MAP3K8P41279 467 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 BNIP3Q12983 259 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 ZNHIT3Q15649 155 aaPredicted RBP19.26■□□□□ 0.67
USP39-203ENST00000409470 MAPK14Q16539 360 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 C12orf73Q69YU5 71 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 SLC16A12Q6ZSM3 486 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 MEX3DQ86XN8 651 aaKnown RBP19.26■□□□□ 0.67
USP39-203ENST00000409470 B3GNT7Q8NFL0 401 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 GNPDA2Q8TDQ7 276 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 FCGR1BQ92637 280 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 DGAT2Q96PD7 388 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 SAP130Q9H0E3 1048 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 EML5Q05BV3 1969 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 USP34Q70CQ2 3546 aa19.26■□□□□ 0.67
USP39-203ENST00000409470 PEX12O00623 359 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 HRO43593 1189 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 KIAA0513O60268 411 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 ZNF182P17025 639 aaPredicted RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 ACVR2AP27037 513 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 RFX3P48380 749 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 ARL4DP49703 201 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 SEPHS1P49903 392 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 SNRPGP62308 76 aaKnown RBP19.25■□□□□ 0.67
USP39-203ENST00000409470 BTG2P78543 158 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 ST3GAL4Q11206 333 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 KCNAB1Q14722 419 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 GRM7Q14831 915 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 AMZ1Q400G9 498 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 PRICKLE2Q7Z3G6 844 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 IQCF1Q8N6M8 205 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 SLC41A3Q96GZ6 507 aa19.25■□□□□ 0.67
USP39-203ENST00000409470 CHRNA10Q9GZZ6 450 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms