RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TNFSF10P50591 281 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 POU6F2P78424 691 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-204ENST00000401473 ARG2P78540 354 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 SLC25A3Q00325 362 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 SYPL1Q16563 259 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 HACD2Q6Y1H2 254 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 SLC15A3Q8IY34 581 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 RBMXL3Q8N7X1 1067 aaKnown RBP14.66□□□□□ -0.06
HMGA1-204ENST00000401473 SH2D2AQ9NP31 389 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 CHCHD2Q9Y6H1 151 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-204ENST00000401473 FREM3P0C091 2139 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 OR6C70A6NIJ9 312 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 SOX30O94993 753 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 IL33O95760 270 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 TFPTP0C1Z6 253 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 CPOXP36551 454 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 KHKP50053 298 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 GZMMP51124 257 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 PNLIPRP2P54317 469 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 FADDQ13158 208 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 OR1C1Q15619 314 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 DECR1Q16698 335 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ARHGAP11BQ3KRB8 267 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 DCST2Q5T1A1 773 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ASB18Q6ZVZ8 466 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 CYP4Z2PQ8N1L4 340 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 MDS2Q8NDY4 140 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 CHDHQ8NE62 594 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 OR8J3Q8NGG0 315 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 OR4C3Q8NH37 302 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 OR10A6Q8NH74 314 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 C9orf43Q8TAL5 461 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 SLC38A5Q8WUX1 472 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 TMEM125Q96AQ2 219 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ZG16BQ96DA0 208 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 WBP1Q96G27 269 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 HES7Q9BYE0 225 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 PIF1Q9H611 641 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 CMTM6Q9NX76 183 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 FLRT3Q9NZU0 649 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ABI3Q9P2A4 366 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ZNF451Q9Y4E5 1061 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 PCDHGB7Q9Y5F8 929 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 PCDHGB3Q9Y5G1 929 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 B2RBV5 119 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 CALB2P22676 271 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 PPIBP23284 216 aaKnown RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 DSTNP60981 165 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 ANKFN1Q8N957 763 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 FAM13CQ8NE31 585 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 HGDQ93099 445 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 COL21A1Q96P44 957 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 NODALQ96S42 347 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 UBL7Q96S82 380 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 HOPXQ9BPY8 73 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 RUBCNLQ9H714 662 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
HMGA1-204ENST00000401473 USP22Q9UPT9 525 aa14.65□□□□□ -0.06
HMGA1-204ENST00000401473 RELNP78509 3460 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 NBASA2RRP1 2371 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 COL6A6A6NMZ7 2263 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 ATXN7O15265 892 aaPredicted RBP14.64□□□□□ -0.07
HMGA1-204ENST00000401473 CCL3P10147 92 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 CYP4B1P13584 511 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 MAGEA8P43361 318 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 AP1ARQ63HQ0 302 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 BICRALQ6AI39 1079 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 RINLQ6ZS11 566 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 PTOV1Q86YD1 416 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 ZADH2Q8N4Q0 377 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 RBM15BQ8NDT2 890 aaKnown RBP14.64□□□□□ -0.07
HMGA1-204ENST00000401473 PAQR8Q8TEZ7 354 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 SGCZQ96LD1 299 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 ZNF583Q96ND8 569 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 RTN4RQ9BZR6 473 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.64□□□□□ -0.074e-6■■■■□ 20.4
HMGA1-204ENST00000401473 SLC25A18Q9H1K4 315 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 PROK2Q9HC23 129 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 EXD2Q9NVH0 621 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 MKLN1Q9UL63 735 aa14.64□□□□□ -0.07
HMGA1-204ENST00000401473 HEATR5AQ86XA9 2040 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 NME4O00746 187 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CDK2AP1O14519 115 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 AGR2O95994 175 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CHRM4P08173 479 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 IL12BP29460 328 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 TMED10P49755 219 aaKnown RBP14.63□□□□□ -0.07
HMGA1-204ENST00000401473 PSME3P61289 254 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 PSPHP78330 225 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.63□□□□□ -0.07
HMGA1-204ENST00000401473 LACTB2Q53H82 288 aaPredicted RBP14.63□□□□□ -0.07
HMGA1-204ENST00000401473 APOOLQ6UXV4 268 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 NUP54Q7Z3B4 507 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 C16orf62Q7Z3J2 963 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 SH3GL1Q99961 368 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 MFRPQ9BY79 579 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 RAD21L1Q9H4I0 556 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 KLHL1Q9NR64 748 aa14.63□□□□□ -0.07
HMGA1-204ENST00000401473 TAS2R1Q9NYW7 299 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms