RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TPTEP56180 551 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 KIR2DS3Q14952 304 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ZC3H3Q8IXZ2 948 aaKnown RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 LRRC20Q8TCA0 184 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 LRRN3Q9H3W5 708 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ADAMTS5Q9UNA0 930 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 A0A0A6YYH2 397 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 A0A1W2PPW3 197 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 A6NJ64 397 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 PTPRRQ15256 657 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 OR4K3Q96R72 315 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 LMF1Q96S06 567 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 PCDHGA8Q9Y5G5 932 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TMEM14AQ9Y6G1 99 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 AKR1C4P17516 323 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SGSHP51688 502 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 HOXC5Q00444 222 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CNPY1Q3B7I2 92 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SNIP1Q8TAD8 396 aaKnown RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 DNAJC15Q9Y5T4 150 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 EEF1E1-BLOC1S5C9J1V9 151 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CCRL2O00421 344 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ZNF252P-AS1Q0IIN9 211 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CYB561A3Q8NBI2 242 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 RHBDF1Q96CC6 855 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 FBXL8Q96CD0 374 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TOX2Q96NM4 488 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 HOXD8P13378 290 aaPredicted RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 LCTLQ6UWM7 567 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SLC37A3Q8NCC5 494 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 SCGB1C1Q8TD33 95 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 MYRFLQ96LU7 910 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 IGSF5Q9NSI5 407 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 FBP2O00757 339 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 TUBG1P23258 451 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 NFATC4Q14934 902 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 DCP2Q8IU60 420 aaKnown RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 PACRGLQ8N7B6 248 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 BTAF1O14981 1849 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CRTAPO75718 401 aaPredicted RBP10.73□□□□□ -0.69
TTC28-201ENST00000397906 STOMP27105 288 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CDKN2CP42773 168 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 C15orf39Q6ZRI6 1047 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
TTC28-201ENST00000397906 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ACPPP15309 386 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 TNFSF4P23510 183 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 RGS6P49758 472 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 TMEM135Q86UB9 458 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 PTERQ96BW5 349 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 MRPL38Q96DV4 380 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 URM1Q9BTM9 101 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 R3HDMLQ9H3Y0 253 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 KCNN3Q9UGI6 736 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 MYH4Q9Y623 1939 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 RGS9O75916 674 aaPredicted RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 TMEM53Q6P2H8 277 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 FAM217AQ8IXS0 508 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 SLC7A9P82251 487 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 MRPS21P82921 87 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 GRAMD2AQ8IUY3 354 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 NAGSQ8N159 534 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CPXM2Q8N436 756 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ARL5BQ96KC2 179 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 NELFAQ9H3P2 528 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 HHATLQ9HCP6 504 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 FAM230AA0A1W2PPH8 454 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 EPHA1P21709 976 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 GNMTQ14749 295 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 DCST2Q5T1A1 773 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CHFRQ96EP1 664 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 TRMT2BQ96GJ1 504 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 SLC30A2Q9BRI3 323 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 COPZ2Q9P299 210 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 TSPAN4O14817 238 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 NUDT21O43809 227 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 F3P13726 295 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 MAGEA8P43361 318 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 CCNJQ5T5M9 372 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 PIP5KL1Q5T9C9 394 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 KDM1BQ8NB78 822 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 SDR9C7Q8NEX9 313 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 OR7G3Q8NG95 312 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 ZC3HAV1LQ96H79 300 aaKnown RBP10.72□□□□□ -0.69
TTC28-201ENST00000397906 CCDC106Q9BWC9 280 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 H3BNC9 293 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 AGBL5Q8NDL9 886 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 OR51Q1Q8NH59 317 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 OR5AK2Q8NH90 309 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 RTP3Q9BQQ7 232 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 HDHD5Q9BXW7 423 aa10.72□□□□□ -0.69
TTC28-201ENST00000397906 PLEK2Q9NYT0 353 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms