RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPATA24Q86W54 205 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 ZNF619Q8N2I2 560 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 TMEM102Q8N9M5 508 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 SPPL2AQ8TCT8 520 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC26A7Q8TE54 656 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 WDR60Q8WVS4 1066 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 RSRC1Q96IZ7 334 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 SAP130Q9H0E3 1048 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 SLC38A1Q9H2H9 487 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 DENND2DQ9H6A0 471 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 CCDC86Q9H6F5 360 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 MTHFD2LQ9H903 347 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 ATP13A2Q9NQ11 1180 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 MYOTQ9UBF9 498 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 ANGPTL2Q9UKU9 493 aa21.79■■□□□ 1.08
TSPAN4-202ENST00000397396 HS6ST1O60243 411 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 KIAA0513O60268 411 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 UMPSP11172 480 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 NAGAP17050 411 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 IL12BP29460 328 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 AQP1P29972 269 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 MAPK11Q15759 364 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 NNATQ16517 81 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 DCAF10Q5QP82 559 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 FIGNL1Q6PIW4 674 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 SPPL2CQ8IUH8 684 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 PEX5LQ8IYB4 626 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 DND1Q8IYX4 353 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 BCORP1Q8N888 145 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 ZSCAN1Q8NBB4 408 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 LZICQ8WZA0 190 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 STMN2Q93045 179 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 CCNL2Q96S94 520 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 HOXD1Q9GZZ0 328 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 DCAF13Q9NV06 445 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 IFT52Q9Y366 437 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 PCDHGA10Q9Y5H3 936 aa21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 GPC6Q9Y625 555 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-202ENST00000397396 IL33O95760 270 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 SERPINA1P01009 418 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 ALPPP05187 535 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 GPIP06744 558 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 FLYWCH1Q4VC44 716 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 RPS26P11Q5JNZ5 115 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 IRAK1BP1Q5VVH5 260 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 FRRS1Q6ZNA5 592 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 ARMC10Q8N2F6 343 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 UGT2B28Q9BY64 529 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 RUBCNLQ9H714 662 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 POLHQ9Y253 713 aa21.77■■□□□ 1.07
TSPAN4-202ENST00000397396 TCRBV3S1A0A5B6 114 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 M0QX08 132 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 KLK10O43240 276 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 PRKNO60260 465 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 C8BP07358 591 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 PSMA4P25789 261 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 ABCD3P28288 659 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 RHDQ02161 417 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 CHRNEQ04844 493 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 EFR3AQ14156 821 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 CCNJQ5T5M9 372 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 TYW3Q6IPR3 259 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 CBLL1Q75N03 491 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 EIF3MQ7L2H7 374 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 ARMC8Q8IUR7 673 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 ZNF527Q8NB42 609 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 DIO2Q92813 273 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 NAF1Q96HR8 494 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 COL21A1Q96P44 957 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 SEC14L3Q9UDX4 400 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 TEKT2Q9UIF3 430 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 BAG5Q9UL15 447 aa21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 YARS2Q9Y2Z4 477 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-202ENST00000397396 SUV39H1O43463 412 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 TLX3O43711 291 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 DBIP07108 87 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 THBS1P07996 1170 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 RFX3P48380 749 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 PNLIPRP2P54317 469 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 ELF3P78545 371 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 CDC20Q12834 499 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 CCNIQ14094 377 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 LARS2Q15031 903 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 ZSWIM7Q19AV6 140 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 TCTN3Q6NUS6 607 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 H3F3CQ6NXT2 135 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 ZFP1Q6P2D0 407 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 OR4N2Q8NGD1 307 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 TMBIM1Q969X1 311 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 OMA1Q96E52 524 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 ARMC7Q9H6L4 198 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 MKLN1Q9UL63 735 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 ZNF232Q9UNY5 417 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 NPFFR2Q9Y5X5 522 aa21.75■■□□□ 1.07
TSPAN4-202ENST00000397396 SPTBN4Q9H254 2564 aa21.74■■□□□ 1.07
TSPAN4-202ENST00000397396 TCRBV5S2A0A599 114 aa21.74■■□□□ 1.07
TSPAN4-202ENST00000397396 DHRS12A0PJE2 317 aa21.74■■□□□ 1.07
TSPAN4-202ENST00000397396 OR6C70A6NIJ9 312 aa21.74■■□□□ 1.07
TSPAN4-202ENST00000397396 RRP8O43159 456 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-202ENST00000397396 FKBP6O75344 327 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms