RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UEVLDQ8IX04 471 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 UBQLNLQ8IYU4 475 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ELMOD2Q8IZ81 293 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF285Q96NJ3 590 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 IL26Q9NPH9 171 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 A0A0G2JMP0 313 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RPP30P78346 268 aaKnown RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF169Q14929 603 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 LETMD1Q6P1Q0 360 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TRIM46Q7Z4K8 759 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PDZD3Q86UT5 571 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TCEAL8Q8IYN2 117 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR4M2Q8NGB6 313 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR9A4Q8NGU2 314 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR5H2Q8NGV7 314 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 OR5B12Q96R08 314 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TTTY10Q9BZA0 68 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF442Q9H7R0 627 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PREBQ9HCU5 417 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM181Q9P2C4 612 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ANKMY1Q9P2S6 941 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SMIM30A4D0T7 59 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 A6NCN8 305 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 TGFBR3Q03167 851 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RAB31Q13636 194 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RAB11BQ15907 218 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 NNATQ16517 81 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 RAB41Q5JT25 222 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 LDLRAD1Q5T700 205 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 CREB3L4Q8TEY5 395 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 MAL2Q969L2 176 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SYT4Q9H2B2 425 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 ZBTB20Q9HC78 741 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SLC39A1Q9NY26 324 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 SMCHD1A6NHR9 2005 aa5.17□□□□□ -1.58
VPS13C-204ENST00000395898 PTGESO14684 152 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PTHP01270 115 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ICAM2P13598 275 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SHC2P98077 582 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TAP2Q03519 686 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MORN1Q5T089 497 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PLBD1Q6P4A8 553 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CHDHQ8NE62 594 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ANKK1Q8NFD2 765 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 APIPQ96GX9 242 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 APOOQ9BUR5 198 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 LOC102725191A0A1B0GVB3 256 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF701M0R085 212 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TNFSF4P23510 183 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DNASE1P24855 282 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CD40LGP29965 261 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CD70P32970 193 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 METTL11BQ5VVY1 283 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 KIAA0907Q7Z7F0 614 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF417Q8TAU3 575 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 LMF2Q9BU23 707 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RIMS3Q9UJD0 308 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SRPK3Q9UPE1 567 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 KIAA0100Q14667 2235 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 A0A1W2PPK0 400 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FAM227AF5H4B4 570 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PTTG1O95997 202 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CDKN2CP42773 168 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CD97P48960 835 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RNASE10Q5GAN6 216 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM201Q5SNT2 666 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C17orf99Q6UX52 265 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 VASH1Q7L8A9 365 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CCDC28AQ8IWP9 274 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR5L1Q8NGL2 311 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR5W2Q8NH69 310 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR14L1PQ8NHC6 308 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PPP1R35Q8TAP8 253 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ADAMTS19Q8TE59 1207 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF587Q96SQ5 575 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM185BQ9H7F4 350 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FZD3Q9NPG1 666 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 GIMAP2Q9UG22 337 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SLX4Q8IY92 1834 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 A0A1W2PQL4 384 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 DRGXA6NNA5 263 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF705EA8MWA4 302 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 K7ERQ8 282 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 PCDH17O14917 1159 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CD68P34810 354 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CPOXP36551 454 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 NOVP48745 357 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 HNRNPA1L2Q32P51 320 aaKnown RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 C1orf220Q5T0J3 134 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 CRTC1Q6UUV9 634 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 FOXRED1Q96CU9 486 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 OR5B2Q96R09 309 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SPIN2AQ99865 258 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 SPIN2BQ9BPZ2 258 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 RNF38Q9H0F5 515 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 UBE2J1Q9Y385 318 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-204ENST00000395898 IRS2Q9Y4H2 1338 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 KCNK5O95279 499 aa5.16□□□□□ -1.58
VPS13C-204ENST00000395898 MAS1P04201 325 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms