RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 STACQ99469 402 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 OSBPL10Q9BXB5 764 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 OR8D2Q9GZM6 311 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 TMEM9BQ9NQ34 198 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 SMPD3Q9NY59 655 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 PDP1Q9P0J1 537 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 GPR55Q9Y2T6 319 aaPredicted RBP11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 CHST2Q9Y4C5 530 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 LYVE1Q9Y5Y7 322 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ENPP4Q9Y6X5 453 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF292O60281 2723 aa11.33□□□□□ -0.6
SPTBN1-203ENST00000389980 ZFHX2Q9C0A1 2572 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 TCRBV16S1A1N1A0A5B0 115 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PRAMEF2O60811 474 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 MITFO75030 526 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CBFA2T3O75081 653 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 SEC24DO94855 1032 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 NKX2-2O95096 273 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ITIH1P19827 911 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 FPR1P21462 350 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PSMD7P51665 324 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 POU6F2P78424 691 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 DCDP81605 110 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PPP2R2BQ00005 443 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 KCNC4Q03721 635 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 MAPK14Q16539 360 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 FAM69BQ5VUD6 431 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PRAMEF8Q5VWM4 474 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PRAMEF7Q5VXH5 474 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF385CQ66K41 422 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZCCHC12Q6PEW1 402 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 MED25Q71SY5 747 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 HIPK1Q86Z02 1210 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CROCCP3Q8IVE0 287 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CLIP4Q8N3C7 705 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF615Q8N8J6 731 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZBTB8BQ8NAP8 495 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 OR52P1PQ8NH57 321 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 TFAP2CQ92754 450 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 FBXL20Q96IG2 436 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 SPATA5L1Q9BVQ7 753 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CTPS2Q9NRF8 586 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 FAM86C1Q9NVL1 165 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CALML5Q9NZT1 146 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 KCNE5Q9UJ90 142 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 CLCA3PQ9Y6N3 262 aa11.32□□□□□ -0.6
SPTBN1-203ENST00000389980 IGHV3-20A0A0C4DH32 117 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TEX51A0A1B0GUA7 166 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TNFRSF11BO00300 401 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PEX12O00623 359 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CNOT3O75175 753 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 DNAJB5O75953 348 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 KCNK2O95069 426 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 LGI1O95970 557 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 IGKV1D-16P01601 117 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 IFI6P09912 130 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 FGF5P12034 268 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ITGA2P17301 1181 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 HOXC5Q00444 222 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 OCA2Q04671 838 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 MERTKQ12866 999 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 EXOC3L2Q2M3D2 409 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 KRT80Q6KB66 452 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TCTN3Q6NUS6 607 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 BORAQ6PGQ7 559 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 GALNT5Q7Z7M9 940 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF554Q86TJ5 538 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CYP4Z1Q86W10 505 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CHDHQ8NE62 594 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PRSS33Q8NF86 280 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ZNF347Q96SE7 839 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PIP5K1AQ99755 562 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 LMF2Q9BU23 707 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ITPAQ9BY32 194 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 OCEL1Q9H607 264 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 MTHFD2LQ9H903 347 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 ACER3Q9NUN7 267 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 TMEFF2Q9UIK5 374 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PAIP2BQ9ULR5 123 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 PCDH17O14917 1159 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 STX11O75558 287 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 DDAH2O95865 285 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CT45A8P0DMV1 189 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 CT45A9P0DMV2 189 aa11.31□□□□□ -0.6
SPTBN1-203ENST00000389980 RHCEP18577 417 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms