RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 COMMD3Q9UBI1 195 aa8.4□□□□□ -1.06
GPNMB-202ENST00000381990 SLC23A1Q9UHI7 598 aa8.4□□□□□ -1.06
GPNMB-202ENST00000381990 ELF5Q9UKW6 265 aaPredicted RBP8.4□□□□□ -1.06
GPNMB-202ENST00000381990 ICKQ9UPZ9 632 aa8.4□□□□□ -1.06
GPNMB-202ENST00000381990 POLHQ9Y253 713 aa8.4□□□□□ -1.06
GPNMB-202ENST00000381990 EXOSC1Q9Y3B2 195 aaKnown RBP8.4□□□□□ -1.06
GPNMB-202ENST00000381990 CLCA3PQ9Y6N3 262 aa8.4□□□□□ -1.06
GPNMB-202ENST00000381990 TLX2O43763 284 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SLC22A5O76082 557 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ACP2P11117 423 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 GALP22466 123 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 UQCRC2P22695 453 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 MAT2AP31153 395 aaKnown RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 CASP9P55211 416 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PER3P56645 1201 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SNRPD2P62316 118 aaKnown RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 DSG2Q14126 1118 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TCTN3Q6NUS6 607 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PAQR6Q6TCH4 344 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TEX261Q6UWH6 196 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 C17orf64Q86WR6 236 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 KRT78Q8N1N4 520 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 NATD1Q8N6N6 113 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SLC37A3Q8NCC5 494 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 OR8H1Q8NGG4 311 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SMPDL3AQ92484 453 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 LRR1Q96L50 414 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 MENTQ9BUN1 341 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 NLNQ9BYT8 704 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 BTBD1Q9H0C5 482 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SPNS1Q9H2V7 528 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 OSGEPL1Q9H4B0 414 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 NARFLQ9H6Q4 476 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 U3KQ87 197 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 A0A1W2PRB8 838 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PRR19A6NJB7 356 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 C2CD4DB7Z1M9 353 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SLC31A1O15431 190 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PRODHO43272 600 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PRKYO43930 277 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SH3BP5O60239 455 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SH3BGRLO75368 114 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PDGFAP04085 211 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 HLA-DPB1P04440 258 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 NAT1P18440 290 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SLC6A1P30531 599 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 RPS25P62851 125 aaKnown RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 RGS1Q08116 209 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FAM71E1Q6IPT2 247 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TMEM107Q6UX40 140 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TMIGD1Q6UXZ0 262 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 COMMD6Q7Z4G1 85 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FAM129CQ86XR2 697 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SLC44A3Q8N4M1 653 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 RAB42Q8N4Z0 105 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 C2orf73Q8N5S3 287 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TM9SF4Q92544 642 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 OTULINQ96BN8 352 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ZNF354BQ96LW1 612 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 C12orf66Q96MD2 445 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 UBL7Q96S82 380 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 INSM2Q96T92 566 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PELI2Q9HAT8 420 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SEMA3GQ9NS98 782 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TVP23BQ9NYZ1 205 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TAC3Q9UHF0 121 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 A0A1W2PRQ8 180 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ISM1B1AKI9 464 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FAM227AF5H4B4 570 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 CHST10O43529 356 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 HPGDSO60760 199 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 HOXC4P09017 264 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 IFI30P13284 250 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 POU3F3P20264 500 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 EVI2BP34910 448 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SMSP52788 366 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PPP2CBP62714 309 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 PPP2CAP67775 309 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 EFNB1P98172 346 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 MEF2AQ02078 507 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 COL28A1Q2UY09 1125 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 HSD17B12Q53GQ0 312 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 EOGTQ5NDL2 527 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 HACD4Q5VWC8 232 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 TRILQ7L0X0 811 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 LRRC17Q8N6Y2 441 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ZNF740Q8NDX6 193 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 CIDECQ96AQ7 238 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
GPNMB-202ENST00000381990 MRGPRX1Q96LB2 322 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FERD3LQ96RJ6 166 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ATF6BQ99941 703 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ARHGAP9Q9BRR9 750 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 FUZQ9BT04 418 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 ACAT2Q9BWD1 397 aa8.39□□□□□ -1.07
GPNMB-202ENST00000381990 KCNK12Q9HB15 430 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms