RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 RAB33AQ14088 237 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■■■■ 44.3
HIPK3-202ENST00000379016 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 NIPA2Q8N8Q9 360 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 OR5AK2Q8NH90 309 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF845Q96IR2 970 aaPredicted RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 GLTPQ9NZD2 209 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 ACTR3BQ9P1U1 418 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF816-ZNF321PA0A0X1KG74 233 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 KDELR3O43731 214 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 CIDEAO60543 219 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 BEST1O76090 585 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 CEBPDP49716 269 aaPredicted RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 CARD18P57730 90 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 RAB11AP62491 216 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF321PQ8N8H1 164 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 SMG8Q8ND04 991 aaKnown RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 FAM103A1Q9BTL3 118 aaKnown RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 FUNDC2Q9BWH2 189 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 GPN2Q9H9Y4 310 aaPredicted RBP12.64□□□□□ -0.39
HIPK3-202ENST00000379016 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 MAP2K7O14733 419 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 BET1O15155 118 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 MED6O75586 246 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 CREG1O75629 220 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 ELK4P28324 431 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 MAP2K4P45985 399 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 PPP4CP60510 307 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 UFM1P61960 85 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 PIM3Q86V86 326 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 PSMF1Q92530 271 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
HIPK3-202ENST00000379016 F5H5P2 479 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 KIAA1211LQ6NV74 962 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 SHISA6Q6ZSJ9 500 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 PRELID2Q8N945 189 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 FAM46AQ96IP4 442 aaKnown RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 CNN2Q99439 309 aaKnown RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 GPR20Q99678 358 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 A0A096LPI6 279 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 MAFO75444 373 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 PHF13Q86YI8 300 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 ACDQ96AP0 544 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 SERINC2Q96SA4 455 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 OR11A1Q9GZK7 315 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 SHARPINQ9H0F6 387 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 FBXO24O75426 580 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 KLF8O95600 359 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TPSB2P20231 275 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TGM4P49221 684 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 SGSHP51688 502 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 CTXN1P60606 82 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 NKX3-2P78367 333 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TPSAB1Q15661 275 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 CD163Q86VB7 1156 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF761Q86XN6 746 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 OR5L1Q8NGL2 311 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 SMPDL3AQ92484 453 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 KLHL21Q9UJP4 597 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 B4DXG7 233 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TFP02787 698 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 M6PRP20645 277 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 MRPL19P49406 292 aaKnown RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 EFNA3P52797 238 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 AADACL3Q5VUY0 350 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 NIPA1Q7RTP0 329 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 OR5L2Q8NGL0 311 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF596Q8TC21 504 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 NMNAT1Q9HAN9 279 aaPredicted RBP12.63□□□□□ -0.39
HIPK3-202ENST00000379016 DLGAP4Q9Y2H0 992 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 AMTP48728 403 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 RAB13P51153 203 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 ADGRF3Q8IZF5 1079 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 OR13C9Q8NGT0 318 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 OR9A1PQ8NGU1 263 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TEPSINQ96N21 525 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 S1PR3Q99500 378 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 TRAPPC2LQ9UL33 140 aa12.63□□□□□ -0.39
HIPK3-202ENST00000379016 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SULF2Q8IWU5 870 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CDKN2AIPNLQ96HQ2 116 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 LRRC42Q9Y546 428 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SPATA31C2B4DYI2 1134 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TBX18O95935 607 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 MTHFD2P13995 350 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms