RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LYSMD4Q5XG99 296 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 C1orf94Q6P1W5 598 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MED25Q71SY5 747 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 WDR5BQ86VZ2 330 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PLXDC1Q8IUK5 500 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CCDC103Q8IW40 242 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CLIP4Q8N3C7 705 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SVOPQ8N4V2 548 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR4K5Q8NGD3 323 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 C12orf43Q96C57 262 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MPP4Q96JB8 637 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ELF4Q99607 663 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PRTFDC1Q9NRG1 225 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 IMPAD1Q9NX62 359 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MUTYHQ9UIF7 546 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RP1P56715 2156 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CYP7B1O75881 506 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TDGF1P13385 188 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 IFNA8P32881 189 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ARRB1P49407 418 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 HSD17B7P56937 341 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RGS8P57771 180 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 POU6F2P78424 691 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 HSD11B2P80365 405 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BNC1Q01954 994 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ST3GAL3Q11203 375 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 STX4Q12846 297 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNF155Q12901 538 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SLX4IPQ5VYV7 408 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CWF19L1Q69YN2 538 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DOK4Q8TEW6 326 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FAR1Q8WVX9 515 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SLC38A4Q969I6 547 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MMABQ96EY8 250 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNF578Q96N58 590 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RBCK1Q9BYM8 510 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 POLR2J2Q9GZM3 115 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CCDC90BQ9GZT6 254 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SPRTNQ9H040 489 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 POLR2J3Q9H1A7 115 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PRMT8Q9NR22 394 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 IRAK4Q9NWZ3 460 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PSORS1C1Q9UIG5 152 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ENO4A6NNW6 628 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNF99A8MXY4 864 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 H3BMQ9 156 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 AP3D1O14617 1153 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR5F1O95221 314 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MT-ND2P03891 347 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TP53P04637 393 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CCNYL3P0C7X3 344 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MSL3P1P0C860 447 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MMP11P24347 488 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GALNSP34059 522 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 STT3AP46977 705 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MAT1AQ00266 395 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ROR2Q01974 943 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CFHR1Q03591 330 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TARDBPQ13148 414 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BIKQ13323 160 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ENTPD8Q5MY95 495 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CCNJQ5T5M9 372 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PRSS42Q7Z5A4 293 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZER1Q7Z7L7 766 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TOR1AIP2Q8NFQ8 470 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GPR151Q8TDV0 419 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PIK3R3Q92569 461 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RIT1Q92963 219 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MVB12AQ96EY5 273 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 COG8Q96MW5 612 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PELOQ9BRX2 385 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 EVA1AQ9H8M9 152 aa16.75■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BDP1A6H8Y1 2624 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SH3D21A4FU49 640 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FRS3O43559 492 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BRINP1O60477 761 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 NID1P14543 1247 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GNSP15586 552 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GSTM3P21266 225 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ACVR2AP27037 513 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CNR2P34972 360 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 IFNGR2P38484 337 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GCGRP47871 477 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GP2P55259 537 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FOXD4Q12950 439 aaPredicted RBP16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GPR68Q15743 365 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PMS2CLQ68D20 193 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 C12orf73Q69YU5 71 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TSSK4Q6SA08 328 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 C11orf74Q86VG3 221 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 KMT5CQ86Y97 462 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 D2HGDHQ8N465 521 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR51Q1Q8NH59 317 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RBM18Q96H35 190 aaKnown RBP16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DGAT2Q96PD7 388 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RHNO1Q9BSD3 238 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ALOXE3Q9BYJ1 711 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FOLH1BQ9HBA9 442 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SEMA4GQ9NTN9 838 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms