RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RPS4Y1P22090 263 aaKnown RBP18.24■□□□□ 0.51
HDAC1-201ENST00000373548 EPHA4P54764 986 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 EEF1A1P68104 462 aaKnown RBP18.24■□□□□ 0.51
HDAC1-201ENST00000373548 ALDH6A1Q02252 535 aaKnown RBP18.24■□□□□ 0.51
HDAC1-201ENST00000373548 MAP4K2Q12851 820 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 COX10Q12887 443 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 SLC13A2Q13183 592 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 TRAM2Q15035 370 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 MAPK14Q16539 360 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 SYT16Q17RD7 645 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 ENTPD8Q5MY95 495 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 C12orf73Q69YU5 71 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 ANKRD13BQ86YJ7 626 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 MYDGFQ969H8 173 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 SLC38A4Q969I6 547 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 DUSP15Q9H1R2 295 aaPredicted RBP18.24■□□□□ 0.51
HDAC1-201ENST00000373548 CACYBPQ9HB71 228 aaKnown RBP18.24■□□□□ 0.51
HDAC1-201ENST00000373548 PDE7BQ9NP56 450 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 LRIT1Q9P2V4 623 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 KLHL3Q9UH77 587 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 HRO43593 1189 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 NTN1O95631 604 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 LCKP06239 509 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 THBS1P07996 1170 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 S1PR1P21453 382 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 PSMB9P28065 219 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 AFF3P51826 1226 aaKnown RBP18.23■□□□□ 0.51
HDAC1-201ENST00000373548 ST3GAL3Q11203 375 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 OR6C4Q8NGE1 309 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 OR52R1Q8NGF1 315 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 HOXB13Q92826 284 aaPredicted RBP18.23■□□□□ 0.51
HDAC1-201ENST00000373548 MCHR1Q99705 422 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 CHRNA10Q9GZZ6 450 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 IRAK4Q9NWZ3 460 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 KCNE5Q9UJ90 142 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 SIT1Q9Y3P8 196 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 GXYLT2A0PJZ3 443 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 AP3D1O14617 1153 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 CTNSO60931 367 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 CDC123O75794 336 aaPredicted RBP18.23■□□□□ 0.51
HDAC1-201ENST00000373548 TNNI3P19429 210 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 NR4A1P22736 598 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 GABRA3P34903 492 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 ERV3-1Q14264 604 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 GARNL3Q5VVW2 1013 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 UBE2UQ5VVX9 321 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 NIPAL1Q6NVV3 410 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 PLEKHM3Q6ZWE6 761 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 GALNT12Q8IXK2 581 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 YIPF6Q96EC8 236 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 ZDHHC12Q96GR4 267 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 IL4I1Q96RQ9 567 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 SPRTNQ9H040 489 aaPredicted RBP18.23■□□□□ 0.51
HDAC1-201ENST00000373548 MRPS33Q9Y291 106 aaKnown RBP18.23■□□□□ 0.51
HDAC1-201ENST00000373548 CLDN16Q9Y5I7 305 aa18.23■□□□□ 0.51
HDAC1-201ENST00000373548 NPIPA5A0A0B4J1W7 369 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 A0A1B0GVT2 93 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 SH3D21A4FU49 640 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 NPIPA7E9PJI5 369 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 KIAA0513O60268 411 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 THY1P04216 161 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 STSP08842 583 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 NPIPA8P0DM63 369 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 SNRPGP62308 76 aaKnown RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 IGLV3-21P80748 117 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF155Q12901 538 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 AQP6Q13520 282 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 CTF1Q16619 201 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 FIGNL1Q6PIW4 674 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 MEX3DQ86XN8 651 aaKnown RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF595Q8IYB9 648 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 METTL27Q8N6F8 245 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 B3GNT7Q8NFL0 401 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ANKRD19PQ9H560 264 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 CLN6Q9NWW5 311 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 TMEM184BQ9Y519 407 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 PEX12O00623 359 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 COQ9O75208 318 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 BCAS1O75363 584 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 NKX2-2O95096 273 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 DBIP07108 87 aaKnown RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 CDK4P11802 303 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF182P17025 639 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF136P52737 540 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 OR1D5P58170 312 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 POU6F2P78424 691 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 BTG2P78543 158 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 STX4Q12846 297 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 BNIP3Q12983 259 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 TBCEQ15813 527 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 EIPR1Q53HC9 387 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 TCTE1Q5JU00 501 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 WDR45BQ5MNZ6 344 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 SLC25A45Q8N413 288 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 IQCF1Q8N6M8 205 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 ADAMTS18Q8TE60 1221 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 MMABQ96EY8 250 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-201ENST00000373548 CD180Q99467 661 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 PRTFDC1Q9NRG1 225 aa18.22■□□□□ 0.51
HDAC1-201ENST00000373548 FITM1A5D6W6 292 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms