RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ANGPTL3Q9Y5C1 460 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 SLC22A7Q9Y694 548 aa13.89□□□□□ -0.19
LMO4-201ENST00000370542 BCKDKO14874 412 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 IDH3BO43837 385 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CST1P01037 141 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CELA2AP08217 269 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 RPS17P08708 135 aaKnown RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 HTR1AP08908 422 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 C8orf89P0DMQ9 161 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 S100A5P33763 92 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 TRPC1P48995 793 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 RGS4P49798 205 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CDKN2DP55273 166 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 ARG2P78540 354 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 MAT1AQ00266 395 aaKnown RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 EMX1Q04741 257 aaPredicted RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 RIPPLY1Q0D2K3 151 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 TRAF3Q13114 568 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CDK5R2Q13319 367 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 TOR1AIP1Q5JTV8 583 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PLAG1Q6DJT9 500 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PRSS41Q7RTY9 318 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 ADCK2Q7Z695 626 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 SHISA5Q8N114 240 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 NKAPQ8N5F7 415 aaKnown RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 SIRT6Q8N6T7 355 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CAMKVQ8NCB2 501 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 GLB1L3Q8NCI6 653 aaPredicted RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 SIMC1Q8NDZ2 872 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PLPP5Q8NEB5 264 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 KBTBD8Q8NFY9 601 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 OR56A3Q8NH54 315 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 OR51Q1Q8NH59 317 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 NR4A3Q92570 626 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PROX1Q92786 737 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 RELTQ969Z4 430 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 SLC47A1Q96FL8 570 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PDLIM5Q96HC4 596 aaKnown RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 DERL2Q9GZP9 239 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 DIABLOQ9NR28 239 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 GMPR2Q9P2T1 348 aaKnown RBP13.88□□□□□ -0.19
LMO4-201ENST00000370542 MKLN1Q9UL63 735 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 PCDHGB6Q9Y5F9 930 aa13.88□□□□□ -0.19
LMO4-201ENST00000370542 CROCCQ5TZA2 2017 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 RGS10O43665 173 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 WDPCPO95876 746 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 NCK1P16333 377 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 IL7RP16871 459 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 AP1S2P56377 157 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 NAE1Q13564 534 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 MEP1AQ16819 746 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 IMPG1Q17R60 797 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 PGS1Q32NB8 556 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 ZNF404Q494X3 552 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 ATP6AP1LQ52LC2 224 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 FAAH2Q6GMR7 532 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 FAM180AQ6UWF9 173 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 MBOAT1Q6ZNC8 495 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 RNF165Q6ZSG1 346 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 USP43Q70EL4 1123 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 CPEB2Q7Z5Q1 589 aaKnown RBP13.87□□□□□ -0.19
LMO4-201ENST00000370542 C17orf64Q86WR6 236 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 LYSMD2Q8IV50 215 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 FAM9CQ8IZT9 166 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 MFSD9Q8NBP5 474 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 GRPEL2Q8TAA5 225 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 SETD6Q8TBK2 473 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 ZHX1-C8orf76Q96EF9 292 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 ATOH8Q96SQ7 321 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 NXF2Q9GZY0 626 aaKnown RBP13.87□□□□□ -0.19
LMO4-201ENST00000370542 NEK6Q9HC98 313 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 PLA2G3Q9NZ20 509 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 ABI3Q9P2A4 366 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 OSGIN2Q9Y236 505 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 WBP11Q9Y2W2 641 aaKnown RBP13.87□□□□□ -0.19
LMO4-201ENST00000370542 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
LMO4-201ENST00000370542 NIPBLQ6KC79 2804 aaeCLIP13.87□□□□□ -0.19
LMO4-201ENST00000370542 SCN3AQ9NY46 2000 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 ANKRD34BA5PLL1 514 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 ASPDHA6ND91 283 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 AGAP5A6NIR3 686 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 FAM25AB3EWG3 89 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 FAM25CB3EWG5 89 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 FAM25GB3EWG6 89 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 LRRTM2O43300 516 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 KLK8O60259 260 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 INMTO95050 263 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 LINC00032P0C843 101 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 CASP3P42574 277 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 XCR1P46094 333 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 AGTR2P50052 363 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 CDH13P55290 713 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 OR4D2P58180 307 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 SLC35A2P78381 396 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 IFITM3Q01628 133 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 TEKQ02763 1124 aa13.86□□□□□ -0.19
LMO4-201ENST00000370542 NPTX1Q15818 432 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms