RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 RHBDL2Q9NX52 303 aa13.26□□□□□ -0.29
SEMA6C-204ENST00000368914 RPH3AQ9Y2J0 694 aaPredicted RBP13.26□□□□□ -0.29
SEMA6C-204ENST00000368914 HEMK1Q9Y5R4 338 aaPredicted RBP13.26□□□□□ -0.29
SEMA6C-204ENST00000368914 MAGEA13PA6NCF6 341 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 D6RAR5 112 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PRAMEF2O60811 474 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 RPS15P62841 145 aaKnown RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 ADPRMQ3LIE5 342 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 MRPL2Q5T653 305 aaKnown RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 MED25Q71SY5 747 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 CBLL1Q75N03 491 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 ADAMTS16Q8TE57 1224 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 DIO2Q92813 273 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 OSBPL11Q9BXB4 747 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 NXF5Q9H1B4 397 aaKnown RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 GORASP2Q9H8Y8 452 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 DTX4Q9Y2E6 619 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 TNFSF15O95150 251 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 RETP07949 1114 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 RXRGP48443 463 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 FAM53BQ14153 422 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 OGFOD3Q6PK18 319 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 RANBP3LQ86VV4 465 aaPredicted RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 CNIH3Q8TBE1 160 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 FOLH1BQ9HBA9 442 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 IL1RAPQ9NPH3 570 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 BLOC1S5-TXNDC5H3BN57 136 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PLD2O14939 933 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 SLC25A12O75746 678 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 ITGA3P26006 1051 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 CCKBRP32239 447 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 HSPA13P48723 471 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 CHN2P52757 468 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PDE7AQ13946 482 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 TRIP6Q15654 476 aaKnown RBP13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PTCHD4Q6ZW05 846 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 FLVCR1-AS1Q8TAF5 88 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 LYRM4Q9HD34 91 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 AGPAT4Q9NRZ5 378 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 PRODH2Q9UF12 536 aa13.25□□□□□ -0.29
SEMA6C-204ENST00000368914 FLRT2O43155 660 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PCBP4P57723 403 aaKnown RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 KCNC4Q03721 635 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 DYNC1I2Q13409 638 aaKnown RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 VEZF1Q14119 521 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 SLC36A3Q495N2 470 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 TTC23Q5W5X9 447 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 MRM1Q6IN84 353 aaKnown RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 KLHL17Q6TDP4 642 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 ZAR1Q86SH2 424 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 TMEM102Q8N9M5 508 aaPredicted RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 ZNF300Q96RE9 604 aaPredicted RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 TTTY10Q9BZA0 68 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 ERVMER34-1Q9H9K5 563 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 MYRFQ9Y2G1 1151 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PCDHGB5Q9Y5G0 923 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 CACNA1BQ00975 2339 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 TRBV4-1A0A0J9YWV2 114 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 CYR61O00622 381 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 IFI30P13284 250 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 ZNF28P17035 718 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 BMP7P18075 431 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PSMB9P28065 219 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PTPN6P29350 595 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 CNOT9Q92600 299 aaKnown RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 FAM46AQ96IP4 442 aaKnown RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 VNN3Q9NY84 501 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 TNFRSF21O75509 655 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 LYNP07948 512 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 ACP2P11117 423 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PRG2P13727 222 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 FPR1P21462 350 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 HES3Q5TGS1 186 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 SAXO2Q658L1 398 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 LACC1Q8IV20 430 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 NAXDQ8IW45 347 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 NRMQ8IXM6 262 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 RASSF5Q8WWW0 418 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 OR51V1Q9H2C8 321 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 MTHFD2LQ9H903 347 aaPredicted RBP13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 CBLCQ9ULV8 474 aa13.24□□□□□ -0.29
SEMA6C-204ENST00000368914 PLXNB3Q9ULL4 1909 aa13.23□□□□□ -0.29
SEMA6C-204ENST00000368914 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
SEMA6C-204ENST00000368914 TRAPPC6AO75865 159 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms