RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CRYBA2P53672 197 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 MGAT2Q10469 447 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 FUT7Q11130 342 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ZSWIM7Q19AV6 140 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 PRICKLE4Q2TBC4 344 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 DEFB110Q30KQ9 67 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 C1orf189Q5VU69 101 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CDC73Q6P1J9 531 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CYP2R1Q6VVX0 501 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 RNF130Q86XS8 419 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ARMC8Q8IUR7 673 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 APLFQ8IW19 511 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 MMP21Q8N119 569 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CHDHQ8NE62 594 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 PLPP5Q8NEB5 264 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 LZICQ8WZA0 190 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 NR4A3Q92570 626 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SLC35B4Q969S0 331 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 MS4A4EQ96PG1 132 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 TRNT1Q96Q11 434 aaKnown RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 ZNF184Q99676 751 aaPredicted RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 DOHHQ9BU89 302 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SPATA5L1Q9BVQ7 753 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 CHID1Q9BWS9 393 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 GPR87Q9BY21 358 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ACTRT3Q9BYD9 372 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 KLHL4Q9C0H6 718 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SLC7A5P2Q9GIP4 190 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SLC26A1Q9H2B4 701 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 ZCCHC3Q9NUD5 404 aaKnown RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 PPIEQ9UNP9 301 aaKnown RBP8.17□□□□□ -1.1
SNX27-201ENST00000368838 ANGPT4Q9Y264 503 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 PCDHGB3Q9Y5G1 929 aa8.17□□□□□ -1.1
SNX27-201ENST00000368838 SCN3AQ9NY46 2000 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 A0A0G2JN53 185 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 A1L4Q6 167 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 TMEM247A6NEH6 219 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 UPK1AO00322 258 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SYT5O00445 386 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 COQ9O75208 318 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SEMA7AO75326 666 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ERAL1O75616 437 aaKnown RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 SERPINB7O75635 380 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 PGM3O95394 542 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 LDLRP01130 860 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 KLK3P07288 261 aaPredicted RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 ACADSP16219 412 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ITGA2P17301 1181 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 LCN1P31025 176 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CRATP43155 626 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 STT3AP46977 705 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CD97P48960 835 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 HMGA2P52926 109 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CRISP3P54108 245 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SNRPNP63162 240 aaKnown RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 PLIN5Q00G26 463 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 FOLH1Q04609 750 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 POU4F2Q12837 409 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 MRPL49Q13405 166 aaKnown RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 TP53BP2Q13625 1128 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ATP1A4Q13733 1029 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SCARB2Q14108 478 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 MAPK11Q15759 364 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNX27-201ENST00000368838 ZNF385CQ66K41 422 aaPredicted RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 MFSD12Q6NUT3 480 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 FAM198BQ6UWH4 519 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 BTLAQ7Z6A9 289 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SVOPLQ8N434 492 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CDRT4Q8N9R6 151 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 FDCSPQ8NFU4 85 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 OR7G1Q8NGA0 311 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 OR9A4Q8NGU2 314 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 BBS10Q8TAM1 723 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ZCCHC10Q8TBK6 192 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 SLC38A5Q8WUX1 472 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 FIG4Q92562 907 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 N4BP2L2Q92802 583 aaPredicted RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 C7orf34Q96L11 122 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ZNF597Q96LX8 424 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 ZNF347Q96SE7 839 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CSF3RQ99062 836 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 PKP2Q99959 881 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 NDC1Q9BTX1 674 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 LMF2Q9BU23 707 aaKnown RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 NUDT9Q9BW91 350 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 TRIM8Q9BZR9 551 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 VCXQ9H320 206 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 PIGUQ9H490 435 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 CXorf21Q9HAI6 301 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 MKKSQ9NPJ1 570 aaPredicted RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 LANCL2Q9NS86 450 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 EXD2Q9NVH0 621 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 GMPR2Q9P2T1 348 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms