RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.37■□□□□ 0.21
CHTOP-203ENST00000368690 NR4A3Q92570 626 aa16.37■□□□□ 0.21
CHTOP-203ENST00000368690 UBE2E3Q969T4 207 aa16.37■□□□□ 0.21
CHTOP-203ENST00000368690 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
CHTOP-203ENST00000368690 MED17Q9NVC6 651 aa16.37■□□□□ 0.21
CHTOP-203ENST00000368690 CSNK1G3Q9Y6M4 447 aa16.37■□□□□ 0.21
CHTOP-203ENST00000368690 GPR171O14626 319 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 SERPINI2O75830 405 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 TPPPO94811 219 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 LRG1P02750 347 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 RPS26P62854 115 aaKnown RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 IDNKQ5T6J7 187 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 AADACL4Q5VUY2 407 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 C6orf120Q7Z4R8 191 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 CMIPQ8IY22 773 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 TREX2Q9BQ50 279 aaPredicted RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 WFDC6Q9BQY6 131 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 SGPP1Q9BX95 441 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 PLA2G12AQ9BZM1 189 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 ACTR6Q9GZN1 396 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 DLL4Q9NR61 685 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 UCKL1Q9NWZ5 548 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 P2RX2Q9UBL9 471 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 PLXNA2O75051 1894 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 MTX2O75431 263 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 ATF4P18848 351 aaPredicted RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 CD53P19397 219 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 ZP3P21754 424 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 DNASE1P24855 282 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 FRKP42685 505 aaPredicted RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 ZNF81P51508 661 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 TBPL1P62380 186 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 SLC36A2Q495M3 483 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 GARNL3Q5VVW2 1013 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 RASSF6Q6ZTQ3 369 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 TOE1Q96GM8 510 aaKnown RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 ZNF764Q96H86 408 aaPredicted RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 SECISBP2Q96T21 854 aaKnown RBP16.36■□□□□ 0.21
CHTOP-203ENST00000368690 SPATA5L1Q9BVQ7 753 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 B4GALT6Q9UBX8 382 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
CHTOP-203ENST00000368690 TRAV6A0A075B6T7 132 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 C2orf92A0A1B0GVN3 265 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 TMEM202A6NGA9 273 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 CD8B2A6NJW9 211 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 SAP18O00422 153 aaKnown RBP16.35■□□□□ 0.21
CHTOP-203ENST00000368690 C8AP07357 584 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 CD8BP10966 210 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 CXCL3P19876 107 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 C4BPBP20851 252 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 THBS2P35442 1172 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 TSPAN31Q12999 210 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 ZNF322Q6U7Q0 402 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-203ENST00000368690 TPRA1Q86W33 373 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 UXS1Q8NBZ7 420 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 ZNF480Q8WV37 535 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 SPRYD4Q8WW59 207 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-203ENST00000368690 SMPDL3AQ92484 453 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 HSD17B8Q92506 261 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 SMG9Q9H0W8 520 aaKnown RBP16.35■□□□□ 0.21
CHTOP-203ENST00000368690 AHSPQ9NZD4 102 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 NFKBIL1Q9UBC1 381 aaPredicted RBP16.35■□□□□ 0.21
CHTOP-203ENST00000368690 MYO7AQ13402 2215 aa16.35■□□□□ 0.21
CHTOP-203ENST00000368690 SOX30O94993 753 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 EIF4EP06730 217 aaKnown RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 WEE1P30291 646 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 MANFP55145 182 aaKnown RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 CKAP5Q14008 2032 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SHHQ15465 462 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 GSG1Q2KHT4 349 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 MPP7Q5T2T1 576 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 NR2C2APQ86WQ0 139 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 GPR135Q8IZ08 494 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SPPL3Q8TCT6 385 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 RAB8BQ92930 207 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 ERMAPQ96PL5 475 aaPredicted RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 TEX12Q9BXU0 123 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 EGLN3Q9H6Z9 239 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 CERS4Q9HA82 394 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SLAMF7Q9NQ25 335 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 ZNF624Q9P2J8 865 aaPredicted RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 KLF15Q9UIH9 416 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 A0A1W2PPL8 197 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 EEF1E1O43324 174 aaKnown RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 RNF13O43567 381 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 ATG13O75143 517 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 HTR1FP30939 366 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 CCT3P49368 545 aaKnown RBP16.34■□□□□ 0.21
CHTOP-203ENST00000368690 MAP4K2Q12851 820 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 LMAN2Q12907 356 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 IER5LQ5T953 404 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SMARCD3Q6STE5 483 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 NXPE4Q6UWF7 544 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 BTN2A1Q7KYR7 527 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SHFQ7M4L6 423 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SLC9B2Q86UD5 537 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 SDR16C5Q8N3Y7 309 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 TRAM1L1Q8N609 369 aa16.34■□□□□ 0.21
CHTOP-203ENST00000368690 KREMEN2Q8NCW0 462 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms