RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 CD180Q99467 661 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 BTBD2Q9BX70 525 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SPATA6Q9NWH7 488 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 CIB4A0PJX0 185 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 BMP8BP34820 402 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC35A2P78381 396 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ATAT1Q5SQI0 421 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 AGAP7PQ5VUJ5 663 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF776Q68DI1 518 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 TBPL2Q6SJ96 375 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 BMP8AQ7Z5Y6 402 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 HMGCLL1Q8TB92 370 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SRMSQ9H3Y6 488 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 DUSP21Q9H596 190 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 UNKLQ9H9P5 680 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 EQTNQ9NQ60 294 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 C14orf166Q9Y224 244 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ARID2Q68CP9 1835 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 RP1P56715 2156 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ERI3O43414 337 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 CREBL2O60519 120 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF254O75437 659 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRSS23O95084 383 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 PIPP12273 146 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 HOXD11P31277 338 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTC1P68032 377 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTA1P68133 377 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 FLI1Q01543 452 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 BCL2L15Q5TBC7 163 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 BEST3Q8N1M1 668 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SVBPQ8N300 66 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 LNX2Q8N448 690 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 Q8N9G6 341 aaPredicted RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR14C36Q8NHC7 312 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 CHTF18Q8WVB6 975 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 GGHQ92820 318 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 PINK1Q9BXM7 581 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 GMPR2Q9P2T1 348 aaKnown RBP5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 NLKQ9UBE8 527 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 SCML1Q9UN30 329 aa5.08□□□□□ -1.6
CDC42BPA-204ENST00000366767 PIKFYVEQ9Y2I7 2098 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC33A1O00400 549 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 HCN1O60741 890 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CRTAPO75718 401 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ALX3O95076 343 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TSPAN15O95858 294 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 C6P13671 934 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ADRB3P13945 408 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CHATP28329 748 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CNR2P34972 360 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CDH11P55287 796 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MLLT11Q13015 90 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SF3B4Q15427 424 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GRASPQ7Z6J2 395 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PDZD3Q86UT5 571 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC44A3Q8N4M1 653 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 COX18Q8N8Q8 333 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 NUP43Q8NFH3 380 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR4K14Q8NGD5 310 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TM9SF2Q99805 663 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MKKSQ9NPJ1 570 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRIM36Q9NQ86 728 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GSKIPQ9P0R6 139 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ARRDC5A6NEK1 342 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MCIDASD6RGH6 385 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ADAM10O14672 748 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 PDGFAP04085 211 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACP5P13686 325 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 C5AR1P21730 350 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TSFMP43897 325 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 AFF3P51826 1226 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GAS6Q14393 721 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MBTPS1Q14703 1052 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CDK10Q15131 360 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 GXYLT1Q4G148 440 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLCO4C1Q6ZQN7 724 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 DNASE1L2Q92874 299 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 NEIL2Q969S2 332 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MALSU1Q96EH3 234 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 EGLN2Q96KS0 407 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC46A2Q9BY10 475 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RHBGQ9H310 441 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTL8Q9H568 366 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 WDR45Q9Y484 360 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 MEIOCA2RUB1 952 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 LRRC72A6NJI9 287 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 KRBOX1C9JBD0 128 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TPST2O60704 377 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 CXCL10P02778 98 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ARSAP15289 507 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACVR2AP27037 513 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 AKT2P31751 481 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 TAS2R38P59533 333 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RPS15AP62244 130 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB40BQ12829 278 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 ILKQ13418 452 aa5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 RSPO2Q6UXX9 243 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR8S1Q8NH09 359 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms