RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 TMPRSS11DO60235 418 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 EEDO75530 441 aaKnown RBP11.32□□□□□ -0.6
MRPL55-209ENST00000366735 UBOX5O94941 541 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 TMIGD3P0DMS9 266 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-209ENST00000366735 NAGAP17050 411 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 NT5EP21589 574 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 SSTR4P31391 388 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 BSGP35613 385 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF136P52737 540 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 EEF1A1P68104 462 aaKnown RBP11.32□□□□□ -0.6
MRPL55-209ENST00000366735 BNIP1Q12981 228 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 TMEM81Q6P7N7 255 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 GPRIN3Q6ZVF9 776 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 RPS27LQ71UM5 84 aaKnown RBP11.32□□□□□ -0.6
MRPL55-209ENST00000366735 RNF175Q8N4F7 328 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 OR4K14Q8NGD5 310 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ACTRT2Q8TDY3 377 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 TRPC4APQ8TEL6 797 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ATP6V1E2Q96A05 226 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ERP27Q96DN0 273 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 TM9SF2Q99805 663 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 SFXN3Q9BWM7 321 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 OSBPL11Q9BXB4 747 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF717Q9BY31 904 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-209ENST00000366735 SHCBP1LQ9BZQ2 653 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 LIME1Q9H400 295 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 MEAF6Q9HAF1 191 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 NEUROD4Q9HD90 331 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 TCF7L2Q9NQB0 619 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 ADAM29Q9UKF5 820 aa11.32□□□□□ -0.6
MRPL55-209ENST00000366735 FAM171A2A8MVW0 826 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 TMEM233B4DJY2 109 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 H0Y3Z8 333 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 PPP6CO00743 305 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SDHDO14521 159 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 GNB5O14775 395 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ACOX3O15254 700 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ATP5HO75947 161 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ATE1O95260 518 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 CLDN9O95484 217 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 OTCP00480 354 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 CLPSP04118 112 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 UROSP10746 265 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 BMP7P18075 431 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 TSPAN8P19075 237 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ABCD3P28288 659 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 CASP3P42574 277 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 CCNG1P51959 295 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 DIO3P55073 304 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 DCAF7P61962 342 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ADAM8P78325 824 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 BTKQ06187 659 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 PLCXD2Q0VAA5 305 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 FUT7Q11130 342 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SNTA1Q13424 505 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SLC9B1Q4ZJI4 515 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SLC30A6Q6NXT4 461 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 GOLGA7Q7Z5G4 137 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 VWA5B2Q8N398 1253 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 L3MBTL4Q8NA19 623 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ZPLD1Q8TCW7 415 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 AGR3Q8TD06 166 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 DOK4Q8TEW6 326 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 WNT2BQ93097 391 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 DACH2Q96NX9 599 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 CCT7Q99832 543 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 RBM24Q9BX46 236 aaKnown RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 UGT2B28Q9BY64 529 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 NUF2Q9BZD4 464 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 PFDN4Q9NQP4 134 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 DLL4Q9NR61 685 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 BEX4Q9NWD9 120 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 KLRF1Q9NZS2 232 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SLC12A4Q9UP95 1085 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 TRIM33Q9UPN9 1127 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 EIF3LQ9Y262 564 aaKnown RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 SLC6A5Q9Y345 797 aa11.31□□□□□ -0.6
MRPL55-209ENST00000366735 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-209ENST00000366735 FLNAP21333 2647 aaKnown RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 C1orf226A1L170 272 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 OR7A17O14581 309 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 CASKO14936 926 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 SLC22A2O15244 555 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PPM1BO75688 479 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 JUNP05412 331 aaKnown RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 CPMP14384 443 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 PORP16435 677 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-209ENST00000366735 GPX3P22352 226 aa11.3□□□□□ -0.6
MRPL55-209ENST00000366735 CHMP24386 653 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms