RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 PPM1BO75688 479 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 SRCP12931 536 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ATP6V1E1P36543 226 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CLCNKAP51800 687 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 SRP54P61011 504 aaKnown RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 KCNJ10P78508 379 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ZNF177Q13360 481 aaPredicted RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 P2RY14Q15391 338 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 TTLL9Q3SXZ7 439 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CTSL3PQ5NE16 218 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ARHGAP40Q5TG30 622 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 MARC1Q5VT66 337 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 METTL2BQ6P1Q9 378 aaKnown RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 CRTC1Q6UUV9 634 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ZNF782Q6ZMW2 699 aaPredicted RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 KIF18BQ86Y91 864 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 DUSP18Q8NEJ0 188 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 OR10G2Q8NGC3 310 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 OR11H4Q8NGC9 324 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CD200R1Q8TD46 325 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ANAPC16Q96DE5 110 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 TSSK3Q96PN8 268 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CMKLR1Q99788 373 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 GHITMQ9H3K2 345 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 UCK1Q9HA47 277 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 RBFOX1Q9NWB1 397 aaKnown RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 IMPAD1Q9NX62 359 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 RPS6KA6Q9UK32 745 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 MGAT4AQ9UM21 535 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 FAM240BA0A1B0GVZ2 78 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 TMEM229AB2RXF0 380 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 TNFRSF11BO00300 401 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 LRRTM2O43300 516 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 NDUFA2O43678 99 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 NUDT21O43809 227 aaKnown RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 NDUFS3O75489 264 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 AP2A2O94973 939 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 GUCA1CO95843 209 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 RAF1P04049 648 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 NUDT7P0C024 238 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 AQP1P29972 269 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CD70P32970 193 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 RENBPP51606 427 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 MAP2K6P52564 334 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 AGFG1P52594 562 aaKnown RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 EPHA4P54764 986 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 CAV3P56539 151 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 IL2P60568 153 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 BTN1A1Q13410 526 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ZNF124Q15973 351 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 FCRLBQ6BAA4 426 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 PAQR6Q6TCH4 344 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 PIANPQ8IYJ0 282 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ABCA7Q8IZY2 2146 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 OR9Q2Q8NGE9 314 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 OR10Z1Q8NGY1 313 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 ZNF431Q8TF32 576 aaPredicted RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 RIT1Q92963 219 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 SLC25A46Q96AG3 418 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 DPCDQ9BVM2 203 aaPredicted RBP7.25□□□□□ -1.25
CCL28-201ENST00000361115 C1QTNF6Q9BXI9 259 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 RACGAP1Q9H0H5 632 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
CCL28-201ENST00000361115 IGLV3-10A0A075B6K4 115 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 RFXANKO14593 260 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 ST8SIA5O15466 376 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 TAPBPO15533 448 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 LYRM1O43325 122 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 AKAP8O43823 692 aaKnown RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 FZD6O60353 706 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 SCGB1D2O95969 90 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 HBQ1P09105 142 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 GLB1P16278 677 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 EPB42P16452 691 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 PCDH1Q08174 1060 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 PCBP2Q15366 365 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCL28-201ENST00000361115 FCN2Q15485 313 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 SPDYE7PQ495Y7 208 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 SHEQ5VZ18 495 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 MAMDC2Q7Z304 686 aaPredicted RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 SERPINA11Q86U17 422 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 GPAT4Q86UL3 456 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 C17orf82Q86X59 251 aaPredicted RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 CARFQ8N187 725 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 STK40Q8N2I9 435 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 POP5Q969H6 163 aaKnown RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 KIAA1143Q96AT1 154 aaPredicted RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 DACT3Q96B18 629 aaPredicted RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 TADA1Q96BN2 335 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 AP2M1Q96CW1 435 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 ALG14Q96F25 216 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 ZC3HAV1LQ96H79 300 aaKnown RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 KLHL15Q96M94 604 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 SECISBP2Q96T21 854 aaKnown RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 MARVELD1Q9BSK0 173 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
CCL28-201ENST00000361115 CPEB1Q9BZB8 566 aaKnown RBP7.24□□□□□ -1.25
CCL28-201ENST00000361115 LRRN3Q9H3W5 708 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms