RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 UBE2FQ969M7 185 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 ELP4Q96EB1 424 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SERINC2Q96SA4 455 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SPATA9Q9BWV2 254 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SEMA6CQ9H3T2 930 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 REEP1Q9H902 201 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 FAM118AQ9NWS6 357 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 WBP11Q9Y2W2 641 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 CENPXA8MT69 81 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 LMO7DNF2Z398 122 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 NDUFA2O43678 99 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 NTN1O95631 604 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 PTNP21246 168 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 IGFBP5P24593 272 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 MPIP34949 423 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 CLK1P49759 484 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 GPR85P60893 370 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 PIGFQ07326 219 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 TGM3Q08188 693 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 IFI44LQ53G44 452 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 CCNJQ5T5M9 372 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 TSPYL5Q86VY4 417 aaPredicted RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 MCATQ8IVS2 390 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 LINC00518Q8N0U6 118 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 MFSD4AQ8N468 514 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 AMER2Q8N7J2 671 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 ATG16L2Q8NAA4 619 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 NUP43Q8NFH3 380 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 OR13F1Q8NGS4 319 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SLA2Q9H6Q3 261 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 GPN2Q9H9Y4 310 aaPredicted RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 LIN7BQ9HAP6 207 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 MRPL39Q9NYK5 338 aaKnown RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 LRIT1Q9P2V4 623 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 TMEM184BQ9Y519 407 aaPredicted RBP11.83□□□□□ -0.52
GGPS1-202ENST00000358966 SLC22A7Q9Y694 548 aa11.83□□□□□ -0.52
GGPS1-202ENST00000358966 CLDN24A6NM45 220 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 A8MUA0 341 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 GALR3O60755 368 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 BMP4P12644 408 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 AGXTP21549 392 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ALAS2P22557 587 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 PPP2R1BP30154 601 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 AFF3P51826 1226 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 LSM11P83369 360 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 BNC1Q01954 994 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 RBBP4Q09028 425 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 TARDBPQ13148 414 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 MEP1AQ16819 746 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ZFP69Q49AA0 526 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 GPAT3Q53EU6 434 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CRB2Q5IJ48 1285 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 SLC35F3Q8IY50 421 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 NLGN4XQ8N0W4 816 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 PARP8Q8N3A8 854 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 OR6F1Q8NGZ6 308 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 RAB2BQ8WUD1 216 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ZFPM2Q8WW38 1151 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 S100ZQ8WXG8 99 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 SLC9A6Q92581 669 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 DMRTB1Q96MA1 342 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 RBM4BQ9BQ04 359 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 RBM4Q9BWF3 364 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 LYVE1Q9Y5Y7 322 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 TRIM64A6NGJ6 449 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 FFAR1O14842 300 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 PCDH17O14917 1159 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 FCMRO60667 390 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ZIC2O95409 532 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CT62P0C5K7 136 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 IFI30P13284 250 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 SPNP16150 400 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ARHGDIAP52565 204 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 FOXL2P58012 376 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 HOXC5Q00444 222 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CFHR1Q03591 330 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CTU2Q2VPK5 515 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 Q5BKY6 102 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 DEF8Q6ZN54 512 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CCDC103Q8IW40 242 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 LRRC25Q8N386 305 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 SVOPLQ8N434 492 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 PEX11GQ96HA9 241 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 OR7D2Q96RA2 312 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ZNF300Q96RE9 604 aaPredicted RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 ADAP2Q9NPF8 381 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 LYARQ9NX58 379 aaKnown RBP11.82□□□□□ -0.52
GGPS1-202ENST00000358966 KIF17Q9P2E2 1029 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 SEC14L3Q9UDX4 400 aa11.82□□□□□ -0.52
GGPS1-202ENST00000358966 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
GGPS1-202ENST00000358966 FAM221BA6H8Z2 402 aa11.81□□□□□ -0.52
GGPS1-202ENST00000358966 M0R129 80 aa11.81□□□□□ -0.52
GGPS1-202ENST00000358966 CYR61O00622 381 aa11.81□□□□□ -0.52
GGPS1-202ENST00000358966 TSPAN4O14817 238 aa11.81□□□□□ -0.52
GGPS1-202ENST00000358966 PRKNO60260 465 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms