RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 SOX18P35713 384 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 TALDO1P37837 337 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 AVPR1BP47901 424 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 GPLD1P80108 840 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 LASP1Q14847 261 aaKnown RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 ZNF620Q6ZNG0 422 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 GHDCQ8N2G8 530 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 OR2T33Q8NG76 320 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 SENP5Q96HI0 755 aaPredicted RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 FAM46AQ96IP4 442 aaKnown RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.59■□□□□ 0.255e-12■■□□□ 11.4
RTN4-204ENST00000357732 SLC38A1Q9H2H9 487 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 FN3KQ9H479 309 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 MCUBQ9NWR8 336 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 STMN3Q9NZ72 180 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 H2AFY2Q9P0M6 372 aaPredicted RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 ENTPD4Q9Y227 616 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 CLCA3PQ9Y6N3 262 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 WASHC1A8K0Z3 465 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 J3QRE1 110 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 NDUFB5O43674 189 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 TRIM23P36406 574 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 CAPZA2P47755 286 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 RFX3P48380 749 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 NTHL1P78549 312 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 PRDX1Q06830 199 aaKnown RBP16.58■□□□□ 0.25
RTN4-204ENST00000357732 TGM3Q08188 693 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 ELAVL3Q14576 367 aaKnown RBP16.58■□□□□ 0.25
RTN4-204ENST00000357732 ZIC1Q15915 447 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 CCNJQ5T5M9 372 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 MRM1Q6IN84 353 aaKnown RBP16.58■□□□□ 0.25
RTN4-204ENST00000357732 MBOAT2Q6ZWT7 520 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 SPRYD4Q8WW59 207 aaPredicted RBP16.58■□□□□ 0.25
RTN4-204ENST00000357732 ZSWIM3Q96MP5 696 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 RNF208Q9H0X6 261 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 PIGUQ9H490 435 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 INPP5EQ9NRR6 644 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 SEMA4GQ9NTN9 838 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 CNIH4Q9P003 139 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 TNFRSF10DQ9UBN6 386 aa16.58■□□□□ 0.25
RTN4-204ENST00000357732 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 SMIM30A4D0T7 59 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 HIDE1A8MVS5 230 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 GPR89AB7ZAQ6 455 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 FKTNO75072 461 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 GPR89BP0CG08 455 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 CSF2RAP15509 400 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 F8A1P23610 371 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 CD79BP40259 229 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 DHCR24Q15392 516 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 CEBPEQ15744 281 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 BTBD16Q32M84 506 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 HNRNPA1L2Q32P51 320 aaKnown RBP16.58■□□□□ 0.24
RTN4-204ENST00000357732 HSD17B12Q53GQ0 312 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 ZNF57Q68EA5 555 aaPredicted RBP16.58■□□□□ 0.24
RTN4-204ENST00000357732 VASNQ6EMK4 673 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 ZFP41Q8N8Y5 198 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 OR4F15Q8NGB8 312 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 OR4Q3Q8NH05 313 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 SNAPC3Q92966 411 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 SECISBP2Q96T21 854 aaKnown RBP16.58■□□□□ 0.24
RTN4-204ENST00000357732 C17orf62Q9BQA9 187 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 RAB11FIP5Q9BXF6 653 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 ACSL5Q9ULC5 683 aa16.58■□□□□ 0.24
RTN4-204ENST00000357732 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 GTPBP1O00178 669 aaKnown RBP16.57■□□□□ 0.24
RTN4-204ENST00000357732 RHOP08100 348 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 ACRP10323 421 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 GNSP15586 552 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 ITGB8P26012 769 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 PRKAG1P54619 331 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 CDC73Q6P1J9 531 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 TMEM91Q6ZNR0 172 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SHFQ7M4L6 423 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 TPRA1Q86W33 373 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 MARVELD3Q96A59 401 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 RAB7BQ96AH8 199 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 OR7D2Q96RA2 312 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 NRTNQ99748 197 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 EXTL2Q9UBQ6 330 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 MALT1Q9UDY8 824 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 A0A0G2JMP0 313 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SHISA3A0PJX4 238 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 LRRTM2O43300 516 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 RNF13O43567 381 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 AGR2O95994 175 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SLC35G4P0C7Q5 338 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 NDUFV2P19404 249 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 CSNK2A2P19784 350 aaPredicted RBP16.57■□□□□ 0.24
RTN4-204ENST00000357732 HIST1H1TP22492 207 aaPredicted RBP16.57■□□□□ 0.24
RTN4-204ENST00000357732 MPIP34949 423 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 ATP6V1E1P36543 226 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 PRMT2P55345 433 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 CLEC12AQ5QGZ9 265 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 C9orf64Q5T6V5 341 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SDE2Q6IQ49 451 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 SLC30A6Q6NXT4 461 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 TMEM107Q6UX40 140 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 WASH2PQ6VEQ5 465 aa16.57■□□□□ 0.24
RTN4-204ENST00000357732 ZNF793Q6ZN11 406 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms