RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 C2orf76Q3KRA6 126 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 VASH1Q7L8A9 365 aaPredicted RBP12.21□□□□□ -0.46
SMC4-202ENST00000357388 GALNT10Q86SR1 603 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 ZNF100Q8IYN0 542 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 OR52N2Q8NGI0 321 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 ZFAND1Q8TCF1 268 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 ADAMTS18Q8TE60 1221 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 DDX1Q92499 740 aaKnown RBP12.21□□□□□ -0.46
SMC4-202ENST00000357388 ENPP4Q9Y6X5 453 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 CLDN24A6NM45 220 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 LEFTY2O00292 366 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 SCAMP2O15127 329 aaKnown RBP12.21□□□□□ -0.46
SMC4-202ENST00000357388 IL1AP01583 271 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 TYRP1P17643 537 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 UNC50Q53HI1 259 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 TANGO2Q6ICL3 276 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 LIX1LQ8IVB5 337 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 OR5D16Q8NGK9 328 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 WDR20Q8TBZ3 569 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 ZBTB8AQ96BR9 441 aa12.21□□□□□ -0.46
SMC4-202ENST00000357388 MMABQ96EY8 250 aaPredicted RBP12.21□□□□□ -0.46
SMC4-202ENST00000357388 ATRNL1Q5VV63 1379 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 TSPAN6O43657 245 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 FBLP22087 321 aaKnown RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 HIST2H3PS2Q5TEC6 136 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 RDH10Q8IZV5 341 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 CLEC4CQ8WTT0 213 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 PIGVQ9NUD9 493 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 S100A7P31151 101 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 UBE2KP61086 200 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 ESCO2Q56NI9 601 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 RAB39BQ96DA2 213 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 FBXL18Q96ME1 805 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 GPRC5BQ9NZH0 403 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 REV1Q9UBZ9 1251 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 MTX2O75431 263 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 CLDN7O95471 211 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 HBQ1P09105 142 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 PKLRP30613 574 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 GGT5P36269 586 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 RAB40BQ12829 278 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 GRB7Q14451 532 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 TMEM35AQ53FP2 167 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 DPY19L4Q7Z388 723 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 PLD6Q8N2A8 252 aaKnown RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 BRI3BPQ8WY22 251 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 FOXJ1Q92949 421 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 ARHGAP39Q9C0H5 1083 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 UFSP2Q9NUQ7 469 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 CFAP20Q9Y6A4 193 aaKnown RBP12.2□□□□□ -0.46
SMC4-202ENST00000357388 PRAMEF11O60813 436 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 TAS2R19P59542 299 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 SYPL2Q5VXT5 272 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 KDELC1Q6UW63 502 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 RABEPKQ7Z6M1 372 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 SLC35F2Q8IXU6 374 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 OR5W2Q8NH69 310 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 L3HYPDHQ96EM0 354 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 ZNF597Q96LX8 424 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 SNX18Q96RF0 628 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 NIPAL2Q9H841 368 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 VRTNQ9H8Y1 702 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 GPR34Q9UPC5 381 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 PCDHGA5Q9Y5G8 931 aa12.2□□□□□ -0.46
SMC4-202ENST00000357388 SOCS5O75159 536 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 KCNE1P15382 129 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CNR2P34972 360 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CASP3P42574 277 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 RAB28P51157 221 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 SGCAQ16586 387 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 TPRA1Q86W33 373 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 NMNAT2Q9BZQ4 307 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 C8orf33Q9H7E9 229 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 D6RAR5 112 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 HOXA9P31269 272 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 SLC11A1P49279 550 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CCL14Q16627 93 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ENPP6Q6UWR7 440 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 SPARTQ8N0X7 666 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 RCBTB1Q8NDN9 531 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 OR51A7Q8NH64 312 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 GPR148Q8TDV2 347 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ZFP90Q8TF47 636 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CHTF18Q8WVB6 975 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 PGAP3Q96FM1 320 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 PTCHD1Q96NR3 888 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms