RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FTCDNL1E5RQL4 147 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 F5H0A9 414 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 THBS2P35442 1172 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SGCAQ16586 387 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 LRFN4Q6PJG9 635 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 PIANPQ8IYJ0 282 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF417Q8TAU3 575 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 BADQ92934 168 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 KLHL15Q96M94 604 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 GPR174Q9BXC1 333 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 C14orf119Q9NWQ9 140 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 MGAT4CQ9UBM8 478 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 HIF3AQ9Y2N7 669 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 CDK5RAP2Q96SN8 1893 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 M0R036 132 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 BCAS1O75363 584 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 IL33O95760 270 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF806P0C7X5 589 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ADRA1AP35348 466 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ACVR1BP36896 505 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SIM1P81133 766 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 MALLQ13021 153 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 CCDC120Q96HB5 630 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 TGM7Q96PF1 710 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 INPP5KQ9BT40 448 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 C2orf42Q9NWW7 574 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 MYOCOSA0A1B0GUC4 107 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 CD8B2A6NJW9 211 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 CD8BP10966 210 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 AMY2BP19961 511 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 NCS1P62166 190 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SHC2P98077 582 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 TBCEQ15813 527 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 PLBD1Q6P4A8 553 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 FIGNL1Q6PIW4 674 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 POGLUT1Q8NBL1 392 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 OR8K3Q8NH51 312 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 MYLIPQ8WY64 445 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 H3BMQ9 156 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SLC33A1O00400 549 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ANKRD28O15084 1053 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 TIMP1P01033 207 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SYPP08247 313 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 AOAHP28039 575 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 STT3AP46977 705 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 PRLHRP49683 370 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 GTDC1Q4AE62 458 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ARSKQ6UWY0 536 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 FAM83HQ6ZRV2 1179 aaPredicted RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SSX6Q7RTT6 188 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SCGB1C1Q8TD33 95 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ASB11Q8WXH4 323 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 UBXN10Q96LJ8 280 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 COG8Q96MW5 612 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 LMF2Q9BU23 707 aaKnown RBP11.11□□□□□ -0.63
COL9A1-202ENST00000357250 HDHD5Q9BXW7 423 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 RBCK1Q9BYM8 510 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 FAM86C1Q9NVL1 165 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 VNN3Q9NY84 501 aa11.11□□□□□ -0.63
COL9A1-202ENST00000357250 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 SMIM30A4D0T7 59 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 GJB3O75712 270 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 PROS1P07225 676 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 EIF2S3P41091 472 aaKnown RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 PRKXP51817 358 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 DLX2Q07687 328 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 SLC6A19Q695T7 634 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 GATSQ8NAP1 163 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 OR5AK2Q8NH90 309 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 FAM174AQ8TBP5 190 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 FRS2Q8WU20 508 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF587Q96SQ5 575 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 NELFAQ9H3P2 528 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 A0A0J9YY10 115 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 FOXE1O00358 373 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 MITFO75030 526 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ADAMTS4O75173 837 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
COL9A1-202ENST00000357250 IFNA2P01563 188 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CBLP22681 906 aa11.1□□□□□ -0.63
COL9A1-202ENST00000357250 CPOXP36551 454 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms