RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SMOXQ9NWM0 555 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 ABCA1O95477 2261 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SERTM1A2A2V5 107 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 DDCP20711 480 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 MAP2K4P45985 399 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 ADARB1P78563 741 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 MZT1Q08AG7 82 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 MEX3DQ86XN8 651 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 METTL25Q8N6Q8 603 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 BPIFCQ8NFQ6 507 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 OR5L1Q8NGL2 311 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 FAM3CQ92520 227 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SOX17Q9H6I2 414 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 SULT2B1O00204 365 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 GABRA4P48169 554 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 GSK3AP49840 483 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 DSC1Q08554 894 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 IL34Q6ZMJ4 242 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 LRRC55Q6ZSA7 311 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 CPNE8Q86YQ8 564 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 TCEAL4Q96EI5 215 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 CNN2Q99439 309 aaKnown RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 PKP2Q99959 881 aa16.39■□□□□ 0.21
COL27A1-201ENST00000356083 VRK1Q99986 396 aaPredicted RBP16.39■□□□□ 0.21
COL27A1-201ENST00000356083 CDC14CA4D256 554 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SEC14L6B5MCN3 397 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SLC11A1P49279 550 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 HOXA1P49639 335 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ACTA2P62736 377 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ACTG2P63267 376 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 KIAA0930Q6ICG6 404 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 KDM1BQ8NB78 822 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 MTG2Q9H4K7 406 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 LMAN1LQ9HAT1 526 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SLC23A2Q9UGH3 650 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 LOC105369274A0A096LPK9 316 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 A8MT66 165 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 GABRDO14764 452 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 AHSGP02765 367 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ART1P52961 327 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SNTB2Q13425 540 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 FAM217AQ8IXS0 508 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 OR4N4Q8N0Y3 316 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 FOXJ1Q92949 421 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 THOC3Q96J01 351 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 RNF39Q9H2S5 420 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SC5DO75845 299 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SLITRK5O94991 958 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 PPP1R3DO95685 299 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 MTHFD2P13995 350 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 RAB5BP61020 215 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 OVCH1Q7RTY7 1134 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ULBP3Q9BZM4 244 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 TMEM14AQ9Y6G1 99 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 RNF225M0QZC1 329 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SLC35A2P78381 396 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 GTPBP8Q8N3Z3 284 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 RBMXL1Q96E39 390 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 HHIPL1Q96JK4 782 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ZNF75AQ96N20 296 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 NUDT22Q9BRQ3 303 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 FAM120CQ9NX05 1096 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 ZIM2Q9NZV7 527 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 DNASE1P24855 282 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 MAGEB1P43366 347 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 IER5LQ5T953 404 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SERPINA12Q8IW75 414 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 FAM83FQ8NEG4 500 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 DUSP13Q9UII6 198 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 CXorf49A8MYA2 514 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 UCHL1P09936 223 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 RNASE10Q5GAN6 216 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 MS4A13Q5J8X5 152 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 LIPJQ5W064 366 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 TMEM104Q8NE00 496 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 OR7G2Q8NG99 324 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 OR52N2Q8NGI0 321 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 OR5AK2Q8NH90 309 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 DHX33Q9H6R0 707 aaKnown RBP16.38■□□□□ 0.21
COL27A1-201ENST00000356083 C5AR2Q9P296 337 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 B4GALT6Q9UBX8 382 aa16.38■□□□□ 0.21
COL27A1-201ENST00000356083 KIAA0907Q7Z7F0 614 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 ERV3-1Q14264 604 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 SPHK2Q9NRA0 654 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 ACSL6Q9UKU0 697 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 RETP07949 1114 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 TFPTP0C1Z6 253 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 PORP16435 677 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 NR0B2Q15466 257 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 TRIM73Q86UV7 250 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 RDH10Q8IZV5 341 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 FCRL5Q96RD9 977 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 MEPEQ9NQ76 525 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 IL2RGP31785 369 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 SNRPD2P62316 118 aaKnown RBP16.37■□□□□ 0.21
COL27A1-201ENST00000356083 PCGF3Q3KNV8 242 aa16.37■□□□□ 0.21
COL27A1-201ENST00000356083 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms