RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 MCHR1Q99705 422 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 TPK1Q9H3S4 243 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 ANKRD19PQ9H560 264 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 ERVK13-1Q9NX77 482 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 ANKMY1Q9P2S6 941 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 PHF11Q9UIL8 331 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 PCOLCE2Q9UKZ9 415 aa20.37■□□□□ 0.85
SHMT1-202ENST00000352886 SPIN1Q9Y657 262 aaPredicted RBP20.37■□□□□ 0.85
SHMT1-202ENST00000352886 SNTNA6NMZ2 147 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 SNX4O95219 450 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 CPEP16870 476 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 WNT4P56705 351 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 PUS10Q3MIT2 529 aaKnown RBP20.36■□□□□ 0.85
SHMT1-202ENST00000352886 TMEM203Q969S6 136 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 TM4SF19Q96DZ7 209 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 BMFQ96LC9 184 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 SERINC2Q96SA4 455 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 NELL2Q99435 816 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 KLHL25Q9H0H3 589 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 RERGLQ9H628 205 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 MRPS18AQ9NVS2 196 aaKnown RBP20.36■□□□□ 0.85
SHMT1-202ENST00000352886 ZNF443Q9Y2A4 671 aaPredicted RBP20.36■□□□□ 0.85
SHMT1-202ENST00000352886 NCKAP1Q9Y2A7 1128 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 GSAPA4D1B5 854 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 GNSP15586 552 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 MTNR1AP48039 350 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 TGM4P49221 684 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 MXD1Q05195 221 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 RUNX2Q13950 521 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 KIR2DS3Q14952 304 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 SHFQ7M4L6 423 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 OR10G6Q8NH81 332 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 ACOT11Q8WXI4 607 aaPredicted RBP20.36■□□□□ 0.85
SHMT1-202ENST00000352886 ASB12Q8WXK4 309 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 TMEM74BQ9NUR3 256 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 C14orf119Q9NWQ9 140 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 TXNL4BQ9NX01 149 aaKnown RBP20.36■□□□□ 0.85
SHMT1-202ENST00000352886 NTMQ9P121 344 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 WDR45Q9Y484 360 aa20.36■□□□□ 0.85
SHMT1-202ENST00000352886 PLD2O14939 933 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 CH25HO95992 272 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 THY1P04216 161 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 UGT2B7P16662 529 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 ACSL1P33121 698 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 GPR4P46093 362 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 MINDY4Q4G0A6 757 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 SLC30A6Q6NXT4 461 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 OR2L13Q8N349 312 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 FLCNQ8NFG4 579 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 FGF20Q9NP95 211 aaPredicted RBP20.35■□□□□ 0.85
SHMT1-202ENST00000352886 DAPP1Q9UN19 280 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 SCML1Q9UN30 329 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 TSPAN19P0C672 248 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 SMIM10L1P0DMW3 83 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 POLR2CP19387 275 aaPredicted RBP20.35■□□□□ 0.85
SHMT1-202ENST00000352886 CTHP32929 405 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 DUSP5Q16690 384 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 DECR1Q16698 335 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 DESI1Q6ICB0 168 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 TYW3Q6IPR3 259 aaKnown RBP20.35■□□□□ 0.85
SHMT1-202ENST00000352886 GDF7Q7Z4P5 450 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 NRMQ8IXM6 262 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 GPR151Q8TDV0 419 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 TMEM255BQ8WV15 326 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 TM9SF4Q92544 642 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 SLC41A3Q96GZ6 507 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 SMIM10Q96HG1 83 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 PRRG3Q9BZD7 231 aa20.35■□□□□ 0.85
SHMT1-202ENST00000352886 MTHFD2LQ9H903 347 aaPredicted RBP20.35■□□□□ 0.85
SHMT1-202ENST00000352886 IRGMA1A4Y4 181 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 B3GALT2O43825 422 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 CDRT1O95170 752 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 DEFA1P59665 94 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 DEFA3P59666 94 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 RUNX1T1Q06455 604 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 TMEM31Q5JXX7 168 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 FCRL6Q6DN72 434 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 LAPTM4BQ86VI4 370 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 SAMD14Q8IZD0 417 aaPredicted RBP20.34■□□□□ 0.85
SHMT1-202ENST00000352886 DOK4Q8TEW6 326 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 GATAD2BQ8WXI9 593 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 CCDC32Q9BV29 185 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 SIAEQ9HAT2 523 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 YARS2Q9Y2Z4 477 aaKnown RBP20.34■□□□□ 0.85
SHMT1-202ENST00000352886 TMEM129A0AVI4 362 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 A6NCN8 305 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 ZNF860A6NHJ4 632 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 KDM4EB2RXH2 506 aaPredicted RBP20.34■□□□□ 0.85
SHMT1-202ENST00000352886 PIP5K1CO60331 668 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 AGR2O95994 175 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 PTNP21246 168 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 FPR3P25089 353 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 TLX1P31314 330 aaPredicted RBP20.34■□□□□ 0.85
SHMT1-202ENST00000352886 BNC1Q01954 994 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 ID2Q02363 134 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 CARTPTQ16568 116 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 CCNJQ5T5M9 372 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 C22orf42Q6IC83 251 aa20.34■□□□□ 0.85
SHMT1-202ENST00000352886 KIAA1324Q6UXG2 1013 aaKnown RBP20.34■□□□□ 0.85
SHMT1-202ENST00000352886 PEX5LQ8IYB4 626 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms