RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ZNF559Q9BR84 538 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 TNFRSF12AQ9NP84 129 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 CIB4A0PJX0 185 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ARNTLO00327 626 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 MT-ND2P03891 347 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 CCDC74AQ96AQ1 378 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 C1QTNF2Q9BXJ5 285 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PITHD1Q9GZP4 211 aaPredicted RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 A0A1W2PPW3 197 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 GXYLT2A0PJZ3 443 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 PPM1BO75688 479 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 GSTM2P28161 218 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 RORCP51449 518 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 DSG2Q14126 1118 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 LIN54Q6MZP7 749 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 USP43Q70EL4 1123 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ADGRG5Q8IZF4 528 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 DTX3Q8N9I9 347 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ABCG2Q9UNQ0 655 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 A0A1W2PPC4 97 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 PLPP1O14494 284 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 AREL1O15033 823 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ITGA10O75578 1167 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 RAB36O95755 333 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 RAB25P57735 213 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 TNFRSF17Q02223 184 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 GGTA1PQ4G0N0 100 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 COL13A1Q5TAT6 717 aaPredicted RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 GATAD2BQ8WXI9 593 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 SFXN2Q96NB2 322 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 TREX2Q9BQ50 279 aaPredicted RBP12.88□□□□□ -0.35
SMC6-201ENST00000351948 SEMA6CQ9H3T2 930 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 CARD8Q9Y2G2 431 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
SMC6-201ENST00000351948 A0A1B0GTL3 188 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 OR5K3A6NET4 321 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 FMO6PO60774 539 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 OLFM2O95897 454 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CEACAM5P06731 702 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 RETP07949 1114 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 HCKP08631 526 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ITGA5P08648 1049 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 SSTR4P31391 388 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ARG2P78540 354 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 LEG1Q6P5S2 330 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ZNF773Q6PK81 442 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 HDDC2Q7Z4H3 204 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CLEC1AQ8NC01 280 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 ZNF717Q9BY31 904 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 CXorf36Q9H7Y0 433 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CBLCQ9ULV8 474 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ZNF749O43361 778 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ABCB7O75027 752 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 MT-ND5P03915 603 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 B4GALNT1Q00973 533 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 COX20Q5RI15 118 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 TLDC1Q6P9B6 456 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 SERPINA11Q86U17 422 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 OR8J1Q8NGP2 316 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ADAMTS16Q8TE57 1224 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 FOXN4Q96NZ1 517 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 MAGIXQ9H6Y5 334 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 RNF6Q9Y252 685 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 TLCD2A6NGC4 264 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 AP1G1O43747 822 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 FURINP09958 794 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ST6GAL1P15907 406 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ROR2Q01974 943 aaKnown RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 HTR4Q13639 388 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 E2F2Q14209 437 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ABHD17CQ6PCB6 329 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ZNF100Q8IYN0 542 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 FAM86B1Q8N7N1 296 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 ZNF775Q96BV0 537 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms