RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PAQR7Q86WK9 346 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 SYT14Q8NB59 555 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 TMEM239Q8WW34 195 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 C16orf58Q96GQ5 468 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 FXYD6Q9H0Q3 95 aa6.78□□□□□ -1.32
VCAN-202ENST00000342785 NPIPA5A0A0B4J1W7 369 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 HTR3EA5X5Y0 456 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 NOTOA8MTQ0 251 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 NPIPA7E9PJI5 369 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CPNE6O95741 557 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 NPIPA8P0DM63 369 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RAB3BP20337 219 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 DNASE1P24855 282 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CLDN2P57739 230 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GNG2P59768 71 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SETD6Q8TBK2 473 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 DNAJA3Q96EY1 480 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR52D1Q9H346 318 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SLC2A4RGQ9NR83 387 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GDE1Q9NZC3 331 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 NDRG4Q9ULP0 352 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 A8MU76 341 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 C11orf98E9PRG8 122 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 EPHA2P29317 976 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 MAZP56270 477 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 MLLT11Q13015 90 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 HENMT1Q5T8I9 393 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 ARHGAP40Q5TG30 622 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SLC29A4Q7RTT9 530 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OLIG3Q7RTU3 272 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMED4Q7Z7H5 227 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 VRK2Q86Y07 508 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CCDC36Q8IYA8 594 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ALG8Q9BVK2 526 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMEM121BQ9BXQ6 578 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 QRSL1Q9H0R6 528 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZBP1Q9H171 429 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SEC61A2Q9H9S3 476 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SPATA6Q9NWH7 488 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZNF69Q9UC07 566 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 AQP9O43315 295 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TSPAN9O75954 239 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 NDUFB2O95178 105 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GKN3PP0CG01 181 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CFL1P23528 166 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 KCNJ5P48544 419 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CTBSQ01459 385 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ARFRP1Q13795 201 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 STEAP3Q658P3 488 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMPRSS12Q86WS5 348 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR5K2Q8NHB8 316 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SLC7A13Q8TCU3 470 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CREB3L1Q96BA8 519 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR4K3Q96R72 315 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 EPHX3Q9H6B9 360 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMEM38AQ9H6F2 299 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RLIMQ9NVW2 624 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ADAM29Q9UKF5 820 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 PHIPQ8WWQ0 1821 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CPED1A4D0V7 1026 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 IL1AP01583 271 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GRPRP30550 384 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GJA4P35212 333 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 IDUAP35475 653 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 P2RY2P41231 377 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR3A3P47888 321 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR3A2P47893 321 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GP2P55259 537 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 SLC25A24Q6NUK1 477 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 DNM1P34Q6PK57 102 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 GALNTL5Q7Z4T8 443 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMEM179BQ7Z7N9 219 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR4F15Q8NGB8 312 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 THAP4Q8WY91 577 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZMYND19Q96E35 227 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 NEURL3Q96EH8 262 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RBP7Q96R05 134 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 MBOAT4Q96T53 435 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RDH8Q9NYR8 311 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ARID1AO14497 2285 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 METTL21EPA6NDL7 271 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 VAMP1P23763 118 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 AKR1D1P51857 326 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 PRKCDQ05655 676 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 LINC00299Q6ZSB3 139 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZNF683Q8IZ20 524 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SYNPOQ8N3V7 929 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 WDR20Q8TBZ3 569 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 CCDC107Q8WV48 283 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ASB15Q8WXK1 588 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 SMPDL3BQ92485 455 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ZNF486Q96H40 463 aaPredicted RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 PEX11GQ96HA9 241 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 FOLH1BQ9HBA9 442 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 USP36Q9P275 1121 aaKnown RBP6.77□□□□□ -1.33
VCAN-202ENST00000342785 TMEM14AQ9Y6G1 99 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 OR2A25A4D2G3 310 aa6.77□□□□□ -1.33
VCAN-202ENST00000342785 ASPDHA6ND91 283 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms