RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 RDH12Q96NR8 316 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 LINC00597Q9H2U6 94 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 POLHQ9Y253 713 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 SALL3Q9BXA9 1300 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 XPNPEP2O43895 674 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 BBS1Q8NFJ9 593 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 ZNF225Q9UK10 706 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
PDPK1-202ENST00000342085 NPIPA5A0A0B4J1W7 369 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 CD8B2A6NJW9 211 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 NPIPA7E9PJI5 369 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 K7ERQ8 282 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 NPIPA8P0DM63 369 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 CD8BP10966 210 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 TACR3P29371 465 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 SLC1A3P43003 542 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 GNB1P62873 340 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 PRAMEF20Q5VT98 475 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 GPR155Q7Z3F1 870 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 OR7G1Q8NGA0 311 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ACTA2P62736 377 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ACTG2P63267 376 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 HNRNPA0Q13151 305 aaKnown RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 MKXQ8IYA7 352 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 GDE1Q9NZC3 331 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 SLC6A14Q9UN76 642 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 MRPS2Q9Y399 296 aaKnown RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 IL3RAP26951 378 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ERV3-1Q14264 604 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 LIPIQ6XZB0 460 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ZBED3Q96IU2 234 aaPredicted RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 FOLH1BQ9HBA9 442 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 RDH14Q9HBH5 336 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 SIDT1Q9NXL6 827 aaKnown RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 TDGQ13569 410 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 STK35Q8TDR2 534 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ZNF431Q8TF32 576 aaPredicted RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 TRMT2BQ96GJ1 504 aaKnown RBP13.71□□□□□ -0.21
PDPK1-202ENST00000342085 TXN2Q99757 166 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 FAIMQ9NVQ4 179 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 ZDHHC7Q9NXF8 308 aa13.71□□□□□ -0.21
PDPK1-202ENST00000342085 RAB27BO00194 218 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 RFXAPO00287 272 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 SSX4O60224 188 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 MPIG6BO95866 241 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 PYCR1P32322 319 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 CD70P32970 193 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 INHBCP55103 352 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 INCA1Q0VD86 236 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 MBTPS1Q14703 1052 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 STEAP4Q687X5 459 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 ACVR1CQ8NER5 493 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 FAM46AQ96IP4 442 aaKnown RBP13.71□□□□□ -0.22
PDPK1-202ENST00000342085 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 PCDHGA1Q9Y5H4 931 aa13.71□□□□□ -0.22
PDPK1-202ENST00000342085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 PDLIM1O00151 329 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 WNT11O96014 354 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 AGFG1P52594 562 aaKnown RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 EDDM3BP56851 147 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 AHSGP02765 367 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 KITLGP21583 273 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 TIA1P31483 386 aaKnown RBP eCLIP13.7□□□□□ -0.223e-8■■■■■ 33.2
PDPK1-202ENST00000342085 SSR4P51571 173 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 APOFQ13790 326 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 OPN5Q6U736 354 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 DDX1Q92499 740 aaKnown RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 ANKRD10Q9NXR5 420 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 SETBP1Q9Y6X0 1596 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 LCHNA4D1U4 455 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 KLHL33A6NCF5 533 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 OR52A4PA6NMU1 304 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 STC2O76061 302 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 PRKACGP22612 351 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 TAS2R38P59533 333 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 POU4F2Q12837 409 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 RPA4Q13156 261 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 GSG1LQ6UXU4 331 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 TCEAL8Q8IYN2 117 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 RDH10Q8IZV5 341 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 CNOT9Q92600 299 aaKnown RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 GJD2Q9UKL4 321 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 UBL4AP11441 157 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 CKMT1AP12532 417 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 PRPH2P23942 346 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 FBXW12Q6X9E4 464 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 LHFPL3Q86UP9 236 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 PSMF1Q92530 271 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
PDPK1-202ENST00000342085 FGF13Q92913 245 aa13.7□□□□□ -0.22
PDPK1-202ENST00000342085 ITFG2Q969R8 447 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms