RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ICKQ9UPZ9 632 aa15.53■□□□□ 0.08
CDC42EP4-201ENST00000335793 KCNK6Q9Y257 313 aa15.53■□□□□ 0.08
CDC42EP4-201ENST00000335793 OR1A2Q9Y585 309 aa15.53■□□□□ 0.08
CDC42EP4-201ENST00000335793 PAHP00439 452 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 GZMKP49863 264 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 RNF144AP50876 292 aaPredicted RBP15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 SLC9A5Q14940 896 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 ZNF791Q3KP31 576 aaPredicted RBP15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 ZNF767PQ75MW2 155 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 MARCH9Q86YJ5 346 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 TBC1D19Q8N5T2 526 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 DOK4Q8TEW6 326 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 SLC25A46Q96AG3 418 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 GPA33Q99795 319 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 DPCDQ9BVM2 203 aaPredicted RBP15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 MCUBQ9NWR8 336 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 PLXNB3Q9ULL4 1909 aa15.52■□□□□ 0.08
CDC42EP4-201ENST00000335793 A0A0B4J293 547 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 C2orf92A0A1B0GVN3 265 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 OR5K4A6NMS3 321 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 PEX14O75381 377 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 ACADLP28330 430 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 CENPAP49450 140 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 MAN2A2P49641 1150 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 MRPL28Q13084 256 aaKnown RBP15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 LCN1P1Q5VSP4 162 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 C12orf73Q69YU5 71 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 OR4C11Q6IEV9 310 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 SMARCD3Q6STE5 483 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 Q8N402 240 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 RNF31Q96EP0 1072 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 EPHX3Q9H6B9 360 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 PTGFRNQ9P2B2 879 aa15.52■□□□□ 0.07
CDC42EP4-201ENST00000335793 SLC22A5O76082 557 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 IFNGR2P38484 337 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ANXA11P50995 505 aaKnown RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 COX10Q12887 443 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ABI3BPQ7Z7G0 1075 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CREB3L4Q8TEY5 395 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 KAT2AQ92830 837 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 LGR4Q9BXB1 951 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 RSPO3Q9BXY4 272 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 POLDIP3Q9BY77 421 aaKnown RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 SIRT3Q9NTG7 399 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 LSM2Q9Y333 95 aaKnown RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 GSAPA4D1B5 854 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ARRDC5A6NEK1 342 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 IGLON5A6NGN9 336 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CD8B2A6NJW9 211 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 LILRB3O75022 631 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CD8BP10966 210 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 EPCAMP16422 314 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 GPR4P46093 362 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 KHKP50053 298 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 RGS8P57771 180 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 PCDH1Q08174 1060 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 TGM3Q08188 693 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 TOR1AIP1Q5JTV8 583 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 COMTD1Q86VU5 262 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 LRRC56Q8IYG6 542 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 OR52A5Q9H2C5 316 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 TRIM45Q9H8W5 580 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CAPN10Q9HC96 672 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 IFT46Q9NQC8 304 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 KLHL28Q9NXS3 571 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 NLKQ9UBE8 527 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 MN1Q10571 1320 aaPredicted RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 ATG2BQ96BY7 2078 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 PGRMC2O15173 223 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 HPGDSO60760 199 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 LILRB5O75023 590 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 FKTNO75072 461 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 IL1AP01583 271 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CSF3P09919 207 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 CTNNB1P35222 781 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 RFX3P48380 749 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 RPS7P62081 194 aaKnown RBP15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 XKRXQ6PP77 449 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 SLC36A4Q6YBV0 504 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 TMEM145Q8NBT3 493 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 POF1BQ8WVV4 589 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 DPP7Q9UHL4 492 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 MAFFQ9ULX9 164 aa15.51■□□□□ 0.07
CDC42EP4-201ENST00000335793 C17orf113A0A1B0GUU1 675 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 PRAMEF27A3QJZ7 478 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 NDUFS6O75380 124 aaKnown RBP15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 PPM1BO75688 479 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 ADH1CP00326 375 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 SOX18P35713 384 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 ZNF77Q15935 545 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 TATDN3Q17R31 274 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 BHLHB9Q6PI77 547 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 C19orf48Q6RUI8 117 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 VRK2Q86Y07 508 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 KIF18BQ86Y91 864 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 SFTPA1Q8IWL2 248 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 FAM26EQ8N5C1 309 aa15.5■□□□□ 0.07
CDC42EP4-201ENST00000335793 FANK1Q8TC84 345 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms