RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 OR51A7Q8NH64 312 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF420Q8TAQ5 688 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 GAB3Q8WWW8 586 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 AMDHD1Q96NU7 426 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF717Q9BY31 904 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 TMEM9BQ9NQ34 198 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ASB6Q9NWX5 421 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 GIN1Q9NXP7 522 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 A0A1W2PRG6 482 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 GJE1A6NN92 205 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 A8MVJ9 347 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 IDSB3KWA1 339 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 MEN1O00255 615 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 SOX1O00570 391 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF195O14628 629 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ECDO95905 644 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 NR0B1P51843 470 aaKnown RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 GBX2P52951 348 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 RPS3AP61247 264 aaKnown RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 TUBA1BP68363 451 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ISLR2Q6UXK2 745 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 TUBA1AQ71U36 451 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 TCEANCQ8N8B7 351 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 PSD4Q8NDX1 1056 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 C19orf18Q8NEA5 215 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF419Q96HQ0 510 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 MSLNLQ96KJ4 702 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 FER1L6-AS2Q96M78 137 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 PAIP1Q9H074 479 aaKnown RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 THSD1Q9NS62 852 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 HPF1Q9NWY4 346 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 C5AR2Q9P296 337 aa6.45□□□□□ -1.38
SF3B1-201ENST00000335508 PTRH2Q9Y3E5 179 aaKnown RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 HEMK1Q9Y5R4 338 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-201ENST00000335508 RASAL1O95294 804 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 DCNP07585 359 aaKnown RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PRKAR1BP31321 381 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 MNDAP41218 407 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PDZK1Q5T2W1 519 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ATG14Q6ZNE5 492 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF676Q8N7Q3 588 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 CPNE2Q96FN4 548 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TOR3AQ9H497 397 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 AGPAT4Q9NRZ5 378 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ETAA1Q9NY74 926 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 LOC100130705A0A1B0GUX0 176 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 CYB5AP00167 134 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PRR35P0CG20 571 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 OSMP13725 252 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FOSL1P15407 271 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 MAPK3P27361 379 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 EIF1P41567 113 aaKnown RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PER3P56645 1201 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 RPS26P62854 115 aaKnown RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 C6orf132Q5T0Z8 1188 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ADOQ96SZ5 270 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 HDHD5Q9BXW7 423 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 DUSP15Q9H1R2 295 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TEX10Q9NXF1 929 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 A0A087WV62 115 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ENO4A6NNW6 628 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FAM25AB3EWG3 89 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FAM25CB3EWG5 89 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FAM25GB3EWG6 89 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FBP2O00757 339 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 GAPDHSO14556 408 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 CASKO14936 926 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 HCRTR1O43613 425 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 VAMP5O95183 116 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PLGP00747 810 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ADORA3P0DMS8 318 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 CD1CP29017 333 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TGFBR3Q03167 851 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 FZD2Q14332 565 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TLR1Q15399 786 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 TMEM225Q6GV28 225 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ZNF773Q6PK81 442 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 WDR20Q8TBZ3 569 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 STT3BQ8TCJ2 826 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 SLC25A36Q96CQ1 311 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 STACQ99469 402 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 KCNS3Q9BQ31 491 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 COMMD4Q9H0A8 199 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PCDHB16Q9NRJ7 776 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 STMN3Q9NZ72 180 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 KIAA1217Q5T5P2 1943 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 SIGLEC6O43699 453 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 EIF4E2O60573 245 aaKnown RBP6.44□□□□□ -1.38
SF3B1-201ENST00000335508 IL9P15248 144 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PLP2Q04941 152 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 POU4F2Q12837 409 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 PMS2P3Q13401 168 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 ARL6IP1Q15041 203 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
SF3B1-201ENST00000335508 VTCN1Q7Z7D3 282 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms