RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 KLF7O75840 302 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 GSNP06396 782 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CCNA2P20248 432 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 MMP11P24347 488 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 GPC1P35052 558 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 GZMMP51124 257 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 TMED1Q13445 227 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 NSDHLQ15738 373 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 EXT1Q16394 746 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 PRSS53Q2L4Q9 553 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 RFX4Q33E94 735 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 PRAMEF17Q5VTA0 474 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 XAF1Q6GPH4 301 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 ZNF621Q6ZSS3 439 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 RAB43Q86YS6 212 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 HIPK1Q86Z02 1210 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 RAB2BQ8WUD1 216 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CIDECQ96AQ7 238 aaPredicted RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 TMEM38AQ9H6F2 299 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 TPT1P8Q9HAU6 139 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SLAMF7Q9NQ25 335 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 POLE3Q9NRF9 147 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 MAT2BQ9NZL9 334 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 WASF3Q9UPY6 502 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 LIPT1Q9Y234 373 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SH3PXD2BA1X283 911 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CLIC1O00299 241 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 IMPDH2P12268 514 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 FEN1P39748 380 aaKnown RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CDKN2CP42773 168 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 RAD23AP54725 363 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CD47Q08722 323 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 NFATC3Q12968 1075 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 DNASE1L3Q13609 305 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SYT16Q17RD7 645 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 C6orf141Q5SZD1 244 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CPEB2Q7Z5Q1 589 aaKnown RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 ANKRD37Q7Z713 158 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 TMEM151BQ8IW70 566 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 VWA5B2Q8N398 1253 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CDRT4Q8N9R6 151 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 LSM14AQ8ND56 463 aaKnown RBP8.84□□□□□ -0.99
C11orf54-201ENST00000331239 M1APQ8TC57 530 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CT55Q8WUE5 264 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 HSPBAP1Q96EW2 488 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 PYURFQ96I23 114 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SLC35A5Q9BS91 424 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CRB3Q9BUF7 120 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 DPH1Q9BZG8 443 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 EVA1AQ9H8M9 152 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 NECTIN3Q9NQS3 549 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 FOXJ2Q9P0K8 574 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CTSFQ9UBX1 484 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 TCFL5Q9UL49 500 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 CLCA3PQ9Y6N3 262 aa8.84□□□□□ -0.99
C11orf54-201ENST00000331239 SAGE2PA6NJ88 616 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 GLOD5A6NK44 160 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 CPSF4O95639 269 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 CD247P20963 164 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 S1PR1P21453 382 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 MATN1P21941 496 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 MAGEA2P43356 314 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 KHKP50053 298 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 PPP1R8Q12972 351 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 TOP3AQ13472 1001 aaPredicted RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 VEZF1Q14119 521 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 MEP1AQ16819 746 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 CTU2Q2VPK5 515 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 MINDY4Q4G0A6 757 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 VWA2Q5GFL6 755 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 MLIPQ5VWP3 458 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 ANKRD26P1Q6NSI1 321 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 TIPARPQ7Z3E1 657 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 C6orf120Q7Z4R8 191 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 TMEM179BQ7Z7N9 219 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 SPARTQ8N0X7 666 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 MMP21Q8N119 569 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 LGI4Q8N135 537 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 TBC1D15Q8TC07 691 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 SGCDQ92629 289 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 NKD1Q969G9 470 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 TP53INP1Q96A56 240 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 LMF2Q9BU23 707 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 ACTRT3Q9BYD9 372 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 LHPPQ9H008 270 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 CXorf36Q9H7Y0 433 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 DUSP22Q9NRW4 184 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 TBC1D23Q9NUY8 699 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 CALML5Q9NZT1 146 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 SAMD4AQ9UPU9 718 aaKnown RBP8.83□□□□□ -1
C11orf54-201ENST00000331239 SDK2Q58EX2 2172 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 LOC100130705A0A1B0GUX0 176 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 SLC1A7O00341 560 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 BCKDKO14874 412 aa8.83□□□□□ -1
C11orf54-201ENST00000331239 LDB3O75112 727 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms