RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LALBAP00709 142 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 GNSP15586 552 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 APEX1P27695 318 aaKnown RBP14.39□□□□□ -0.11
BRCC3-201ENST00000330045 MPIP34949 423 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 TRHRP34981 398 aaPredicted RBP14.39□□□□□ -0.11
BRCC3-201ENST00000330045 KRT33BQ14525 404 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 SLC30A6Q6NXT4 461 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 SLC48A1Q6P1K1 146 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 OR4F15Q8NGB8 312 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 OR2L8Q8NGY9 312 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 PLA2G2FQ9BZM2 168 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 WDR26Q9H7D7 661 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 RANGRFQ9HD47 186 aaPredicted RBP14.39□□□□□ -0.11
BRCC3-201ENST00000330045 CES1P1Q9UKY3 287 aa14.39□□□□□ -0.11
BRCC3-201ENST00000330045 SURF4O15260 269 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SLC2A2P11168 524 aaPredicted RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 FCARP24071 287 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 PKLRP30613 574 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 DRD3P35462 400 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TRIM23P36406 574 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 MC3RP41968 323 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 AVPR1BP47901 424 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 HOXC5Q00444 222 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 DSG2Q14126 1118 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 AADACL4Q5VUY2 407 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 C19orf18Q8NEA5 215 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 OR2L5Q8NG80 312 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 OR4Q3Q8NH05 313 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 OSTF1Q92882 214 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TMED9Q9BVK6 235 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TEX12Q9BXU0 123 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 HDHD5Q9BXW7 423 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SLC6A20Q9NP91 592 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 CALML5Q9NZT1 146 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 LIPT1Q9Y234 373 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 KCNK6Q9Y257 313 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 BOLA1Q9Y3E2 137 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 CHST2Q9Y4C5 530 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TRPM6Q9BX84 2022 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 GPR89BP0CG08 455 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 F3P13726 295 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 CERS1P27544 350 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 STAT5AP42229 794 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 RACK1P63244 317 aaKnown RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 DMPKQ09013 629 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 QPRTQ15274 297 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TMEM44Q2T9K0 475 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 CNIH2Q6PI25 160 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SYCE2Q6PIF2 218 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 NOXA1Q86UR1 476 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 NKAIN4Q8IVV8 208 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 Q8N402 240 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 UBASH3BQ8TF42 649 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 ACOT11Q8WXI4 607 aaPredicted RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SMARCD2Q92925 531 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 ELP4Q96EB1 424 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 FYTTD1Q96QD9 318 aaKnown RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 DCLRE1CQ96SD1 692 aaKnown RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 COQ7Q99807 217 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SLX1AQ9BQ83 275 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SOSTQ9BQB4 213 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TMEM246Q9BRR3 403 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 PPP1R3EQ9H7J1 279 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 SFXN1Q9H9B4 322 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 GIMAP4Q9NUV9 329 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 PAQR5Q9NXK6 330 aaPredicted RBP14.38□□□□□ -0.11
BRCC3-201ENST00000330045 KLHL28Q9NXS3 571 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
BRCC3-201ENST00000330045 A0A0B4J293 547 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 AGRPO00253 132 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 HCN1O60741 890 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 HPGDSO60760 199 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 HLA-DPB1P04440 258 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 CELP19835 753 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 FPR3P25089 353 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF155Q12901 538 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 TRIQKQ629K1 86 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 C16orf62Q7Z3J2 963 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 MARCH9Q86YJ5 346 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 TRIM48Q8IWZ4 208 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 KLHL36Q8N4N3 616 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 ARIH2OSQ8N7S6 290 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 RNF31Q96EP0 1072 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 RPP25Q9BUL9 199 aaKnown RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 RAB11FIP5Q9BXF6 653 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 BTBD1Q9H0C5 482 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 IL20Q9NYY1 176 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 DOCK8Q8NF50 2099 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 CENPBD1B2RD01 187 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 GABRPO00591 440 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 CHST10O43529 356 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 AKAP8O43823 692 aaKnown RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 HLA-DQB1P01920 261 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 YES1P07947 543 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF24P17028 368 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 AHRP35869 848 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms