RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RHOXF1Q8NHV9 184 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 SLC41A2Q96JW4 573 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
TPM3-205ENST00000328159 FOLH1BQ9HBA9 442 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 FBXO34Q9NWN3 711 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 PTTG2Q9NZH5 202 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 ERVK-18Q9QC07 812 aa13.9□□□□□ -0.18
TPM3-205ENST00000328159 CENPVL1A0A0U1RR11 272 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 A0A1B0GTQ1 180 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 OR2W5A6NFC9 320 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 CPSF4LA6NMK7 179 aaKnown RBP13.89□□□□□ -0.19
TPM3-205ENST00000328159 ZAR1LA6NP61 321 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 A8MU76 341 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 AP3D1O14617 1153 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 KIAA0513O60268 411 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 SOX30O94993 753 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 CSNK2BP67870 215 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 EEF1A1P68104 462 aaKnown RBP13.89□□□□□ -0.19
TPM3-205ENST00000328159 CSTF1Q05048 431 aaKnown RBP13.89□□□□□ -0.19
TPM3-205ENST00000328159 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.19
TPM3-205ENST00000328159 ILKQ13418 452 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 FIGNL1Q6PIW4 674 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 WDR74Q6RFH5 385 aaPredicted RBP13.89□□□□□ -0.19
TPM3-205ENST00000328159 TTLL10Q6ZVT0 673 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 KMT5CQ86Y97 462 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 MORN4Q8NDC4 146 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 OR1L3Q8NH93 324 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 PIGKQ92643 395 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 DIO2Q92813 273 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 PMM1Q92871 262 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 FKBP10Q96AY3 582 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 DUSP23Q9BVJ7 150 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 CCDC90BQ9GZT6 254 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 POLE3Q9NRF9 147 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 SEMA4GQ9NTN9 838 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 HEMK1Q9Y5R4 338 aaPredicted RBP13.89□□□□□ -0.19
TPM3-205ENST00000328159 MAU2Q9Y6X3 613 aa13.89□□□□□ -0.19
TPM3-205ENST00000328159 CLDN24A6NM45 220 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 BRINP1O60477 761 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CYP7B1O75881 506 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 POU1F1P28069 291 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 SSTR4P31391 388 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 IFNA8P32881 189 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 EMDP50402 254 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 HOXC5Q00444 222 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 TEKQ02763 1124 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ST3GAL3Q11203 375 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ZNF267Q14586 743 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 TRAM2Q15035 370 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ZNHIT3Q15649 155 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 MAPK14Q16539 360 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ENTPD8Q5MY95 495 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 TMEM236Q5W0B7 351 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 P3H2Q8IVL5 708 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ZNF540Q8NDQ6 660 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 OR13F1Q8NGS4 319 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 SLC38A4Q969I6 547 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 MVB12AQ96EY5 273 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 MCHR1Q99705 422 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 POLR2J3Q9H1A7 115 aaKnown RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 ANKRD19PQ9H560 264 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 LANCL2Q9NS86 450 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 IMPAD1Q9NX62 359 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NDOR1Q9UHB4 597 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 KCNE5Q9UJ90 142 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ADAMTS20P59510 1910 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NPIPA5A0A0B4J1W7 369 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NPIPA7E9PJI5 369 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 HRKO00198 91 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 SEC14L2O76054 403 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NPIPA8P0DM63 369 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 FOLR1P15328 257 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 GABRB1P18505 474 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ITIH1P19827 911 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ALAS2P22557 587 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 SLC5A2P31639 672 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 PEX19P40855 299 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 GCGRP47871 477 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CDC42P60953 191 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 PSG6Q00889 435 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 TUBA3CQ13748 450 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NR0B2Q15466 257 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CD300LDQ6UXZ3 194 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CCDC103Q8IW40 242 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 MAML2Q8IZL2 1156 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 OR4C6Q8NH72 309 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 SAP25Q8TEE9 199 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 IPCEF1Q8WWN9 437 aaPredicted RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 EDAQ92838 391 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ISOC1Q96CN7 298 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 CNDP2Q96KP4 475 aaKnown RBP13.88□□□□□ -0.19
TPM3-205ENST00000328159 VSTM2LQ96N03 204 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 PELOQ9BRX2 385 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms